Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.42944	Skp1a	S-phase kinase-associated protein 1A	11	11 31.0 cM	21402
Gene Ontology	kinase activity | protein binding | SCF ubiquitin ligase complex | translation elongation factor activity
Human Homolog	SKP1A[S-phase kinase-associated protein 1A (p19A)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 165 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAGACTGTG TAAAAATTAA (2) TATACCAACT (2) TGGGTGTCTT TGGTCCCAGT TGTAGTTCCA TTATTTCTTC (2) TTGGGTGGAT (2) 58.7 0.0587 Cb medulloblastoma AAGTAAGTGT ATACTGTCAT CAAGACTGTG CAATGGTGCA TAAAAATTAA (2) TATACCAACT (2) TGGGGTGTCC TGGGTGTCTT TGGTAGTTCC (4) TGTAATTTCC TGTAGTTCCA TTGGGTGGAT (2) 80.9 0.0809 P8 GC+1d culture AAGTAAGTGT ATACTGTCAT CAAGACTGTG TAAAAATTAA (2) TATACCAACT (2) TGGGTGTCTT TGGTAGTTCC (4) TGTAATTTCC TGTAGTTCCA TTGGGTGGAT (2) 58 0.058 P8 GC+SHH+1d culture AAGTAAGTGT CAAGACTGTG TAAAAATTAA (2) TATACCAACT (2) TGGGTGTCTT TGGTAGTTCC (4) TGTAATTTCC TGTAGTTCCA TTATTTCTTC (2) TTGGGTGGAT (2) 62.1 0.0621 3T3 fibroblasts AAGTAAGTGT TGGGTGTCTT TGGTAGTTCC (4) 49.1 0.0491 E15 cortex AAGTAAGTGT CAATGGTGCA TAAAAATTAA (2) TATACCAACT (2) TGGGTGTCTT TGGTAGTTCC (4) TGTAGTTCCA 49.2 0.0492 P1 cortex AAGTAAGTGT TGGGTGTCTT TGTAGTTCCA 45.4 0.0454 Hypothalamus AAGTAAGTGT CAATGGTGCA CAGTGAAGAA TAAAAATTAA (2) TATACCAACT (2) TGGGTGTCTT TGGTAGTTCC (4) TGTAGTTCCA TTGGGTGGAT (2) 70.5 0.0705 E12.5 retina AAGTAAGTGT ATACTGTCAT CAATGGTGCA CTGGAAGAAA CTGGAAGATT TATACCAACT (2) TGGGTGTCTT TGTAGTTCCA TTGGGTGGAT (2) 45.2 0.0452 E14.5 retina AAGTAAGTGT CAATGGTGCA CAGTGAAGAA TAAAAATTAA (2) TATACCAACT (2) TGGGTGTCTT TGGTAGTTCC (4) TGTAGTTCCA TTATTTCTTC (2) 32.6 0.0326 E16.5 retina AAGTAAGTGT TAAAAATTAA (2) TATACCAACT (2) TGGGTGTCTT TGGTAGTTCC (4) TGTAATTTCC TGTAGTTCCA TTATTTCTTC (2) TTGGGTGGAT (2) 34.3 0.0343 E18.5 retina AAGTAAGTGT CAAGACTGTG CTGGAAGATT TAAAAATTAA (2) TATACCAACT (2) TGGGTGTCTT TGGTAGTTCC (4) TGGTCCCAGT TGTAGTTCCA TTATTTCTTC (2) 54.4 0.0544 P0.5 retina AAGTAAGTGT CAAGACTGTG CTGGAAGAAA TGGGTGTCTT TGGTAGTTCC (4) TGTAATTTCC TGTAGTTCCA TTATTTCTTC (2) 45.3 0.0453 P2.5 retina AAGTAAGTGT CAAGACTGTG CAATGGTGCA TAAAAATTAA (2) TGGGGTGTCC TGGGTGTCTT TGGTAGTTCC (4) TGGTCCCAGT TGTAATTTCC TGTAGTTCCA TTATTTCTTC (2) 44.3 0.0443 P4.5 retina AAGTAAGTGT CAAGACTGTG TAAAAATTAA (2) TATACCAACT (2) TGGGTGTCTT TGGTAGTTCC (4) TGTAGTTCCA 43.7 0.0437 P6.5 retina CAAGACTGTG CAATGGTGCA TAAAAATTAA (2) TATACCAACT (2) TGGGTGTCTT TGTAGTTCCA TTATTTCTTC (2) TTTGGTTGAT (3) 30.1 0.0301 P10.5 crx- retina AAGTAAGTGT CTGGAAGATT TAAAAATTAA (2) TGGGTGTCTT TGGTAGTTCC (4) TGTAATTTCC TGTAGTTCCA TTGGGTGGAT (2) TTTCCCCAAA (2) 41 0.041 P10.5 crx+ retina AAGTAAGTGT CAGTGAAGAA TATACCAACT (2) TGGGTGTCTT TGGTAGTTCC (4) TGTAGTTCCA TTGGGTGGAT (2) TTTGGTTGAT (3) 61.5 0.0615 Adult retinal AAGTAAGTGT TATACCAACT (2) TGGGGTGTCC TGGGTGTCTT TGTAGTTCCA TTATTTCTTC (2) TTTCCCCAAA (2) TTTGGTTGAT (3) 29.9 0.0299 ONL CTGGAAGAAA TATACCAACT (2) TGGGTGTCTT TGTAATTTCC TGTAGTTCCA TTGGGTGGAT (2) TTTCCCCAAA (2) 30.4 0.0304