| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AGTGTGACGT (2) CCAGTCTGTG (3) CCTTGGGCCA GAAACGTGCG
| 14.6 | 0.0146 |
| Cb medulloblastoma | AGTGTGACGT (2) CCAGTCTGTG (3) GAAACGTGCG
| 18.5 | 0.0185 |
| P8 GC+1d culture | AGTGTGACGT (2) CCAGTCTGTG (3) CCTTGGGCCA GAAACGTGCG
| 9 | 0.009 |
| P8 GC+SHH+1d culture | AGTGTGACGT (2) CCAGTCTGTG (3) CCTTGGGCCA GAAACGTGCG GCAGCCCTAC
| 18.8 | 0.0188 |
| 3T3 fibroblasts | AGTGTGACGT (2) CCAGTCTGTG (3) CCTTGGGCCA GCAGCCCTAC GGCAGCAGTG (2)
| 35 | 0.035 |
| E15 cortex | AGTGTGACGT (2) GGCAGCAGTG (2)
| 9.8 | 0.0098 |
| P1 cortex | AGTGTGACGT (2) CCAGTCTGTG (3)
| 9 | 0.009 |
| Hypothalamus | AGTGTGACGT (2) CCTTGGGCCA
| 3.6 | 0.0036 |
| E12.5 retina | CCAGTCTGTG (3)
| 15 | 0.015 |
| E14.5 retina | AGTGTGACGT (2) CCAGTCTGTG (3) GCAGCCCTAC
| 9.1 | 0.0091 |
| E16.5 retina | AGTGTGACGT (2) CCAGTCTGTG (3) CCTTGGGCCA
| 18.1 | 0.0181 |
| E18.5 retina | AGTGTGACGT (2) CCAGTCTGTG (3) CCTTGGGCCA
| 18.1 | 0.0181 |
| P0.5 retina | AGTGTGACGT (2) CCAGTCTGTG (3)
| 19.6 | 0.0196 |
| P2.5 retina | AGTGTGACGT (2) CCAGTCTGTG (3) CCTTGGGCCA GCAGCCCTAC
| 21.2 | 0.0212 |
| P4.5 retina | AGTGTGACGT (2) CCAGTCTGTG (3) CCTTGGGCCA GCAGCCCTAC
| 23.9 | 0.0239 |
| P6.5 retina | AGTGTGACGT (2) CCAGTCTGTG (3) CCTTGGGCCA GCAGCCCTAC GGCAGCAGTG (2)
| 28.4 | 0.0284 |
| P10.5 crx- retina | AGTGTGACGT (2) CCAGTCTGTG (3) CCTTGGGCCA
| 20.5 | 0.0205 |
| P10.5 crx+ retina | AGTGTGACGT (2) CCAGTCTGTG (3)
| 23.1 | 0.0231 |
| Adult retinal | AGTGTGACGT (2) CCAGTCTGTG (3) CCTTGGGCCA GAAACGTGCG GCAGCCCTAC
| 20.5 | 0.0205 |
| ONL | AGTGTGACGT (2) CCAGTCTGTG (3) CCTTGGGCCA GCAGCCCTAC
| 11.4 | 0.0114 |