Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4339	D2Wsu85e	DNA segment, Chr 2, Wayne State University 85, expressed	2	2 105.0 cM	27996
Mm.4339	Lama5	laminin, alpha 5	2	2 106.0 cM	16776
Gene Ontology	basal lamina | basement membrane | branching morphogenesis | cell adhesion | extracellular matrix | extracellular matrix structural constituent | extracellular space | integrin binding | laminin-1 | lung development | metabolism | muscle development | organogenesis | oxidoreductase activity | protein binding | receptor activity | receptor binding | regulation of cell adhesion | regulation of cell migration | regulation of embryonic development | structural molecule activity | translation initiation factor activity | translational initiation
Human Homolog	LAMA5[laminin, alpha 5]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 33 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGGAGATGG (3) GGCAGGGACA (2) 3.2 0.0032 Cb medulloblastoma CTGGAGATGG (3) GGGAGTGTCA (3) 4.6 0.0046 P8 GC+1d culture CTGGAGATGG (3) GCATACACTG 9.1 0.0091 P8 GC+SHH+1d culture CTGGAGATGG (3) GCATACACTG GGCAGGGACA (2) 14 0.014 3T3 fibroblasts CTGGAGATGG (3) 3.5 0.0035 Hypothalamus CTGGAGATGG (3) GGCAGGGACA (2) 5.4 0.0054 E12.5 retina CTGGAGATGG (3) GCATACACTG 3.8 0.0038 E14.5 retina CTGGAGATGG (3) 5.5 0.0055 E16.5 retina ACTTTTTCAC CTGGAGATGG (3) 5.4 0.0054 E18.5 retina GCATACACTG 1.8 0.0018 P0.5 retina CTGGAGATGG (3) GGGAGTGTCA (3) 4 0.004 P2.5 retina CTGGAGATGG (3) 3.5 0.0035 P4.5 retina ACTTTTTCAC CTGGAGATGG (3) 11.9 0.0119 P6.5 retina CTGGAGATGG (3) 3.3 0.0033 P10.5 crx- retina CTGGAGATGG (3) GCATACACTG 18.6 0.0186 P10.5 crx+ retina ACTTTTTCAC CTGGAGATGG (3) GCATACACTG GGGAGTGTCA (3) 11.5 0.0115 Adult retinal CTGGAGATGG (3) GCATACACTG 9.3 0.0093 ONL CTGGAGATGG (3) 7.7 0.0077