Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.43760	Spc18	signal peptidase complex	7		56529
Gene Ontology	endoplasmic reticulum | hydrolase activity | integral to membrane | membrane | microsome | peptidase activity | proteolysis and peptidolysis | serine-type peptidase activity | signal peptide processing
Human Homolog	SPC18[signal peptidase complex (18kD)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 102 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAGCAAGA (2) AGGGCACTGG (2) CACCCGCCCA GGCAGTCCCC GGGTGCCCCA (2) TGCACCGTGG 27.6 0.0276 Cb medulloblastoma AGGGCACTGG (2) AGTTCAAACC GGCAGTCCCC GGGTGCCCCA (2) TGCACCGTGG 30 0.03 P8 GC+1d culture AAAAGCAAGA (2) AGGGCACTGG (2) AGTTCAAACC CAGAGCTGTG (3) GGGTGCCCCA (2) TGCACCGTGG 36.4 0.0364 P8 GC+SHH+1d culture AAAAGCAAGA (2) AGGGCACTGG (2) AGTTCAAACC GCCTACAGAG GGCAGTCCCC GGGTGCCCCA (2) TGCACCGGGG TGCACCGTGG 48.1 0.0481 3T3 fibroblasts AGGGCACTGG (2) GGGTGCCCCA (2) TGCACCGTGG 17.5 0.0175 E15 cortex AGGGCACTGG (2) GGCAGTCCCC TGCACCGTGG 24.6 0.0246 P1 cortex AAAAGCAAGA (2) TGCACCGTGG 9 0.009 Hypothalamus AAAAGCAAGA (2) AGGGCACTGG (2) CAGAGCTGTG (3) TGCACCGTGG 47 0.047 E12.5 retina AAAAGCAAGA (2) AGGGCACTGG (2) CACCCGCCCA GGCAGTCCCC GGGTGCCCCA (2) TGCACCGTGG 35.7 0.0357 E14.5 retina AAAAGCAAGA (2) AGGGCACTGG (2) AGTTCAAACC CAGAGCTGTG (3) GCCTACAGAG GGCAGTCCCC GGGTGCCCCA (2) TGCACCGTGG 49.1 0.0491 E16.5 retina AAAAGCAAGA (2) AGGGCACTGG (2) AGTTCAAACC GGGTGCCCCA (2) TGCACCGTGG 34.5 0.0345 E18.5 retina AAAAGCAAGA (2) AGGGCACTGG (2) AGTTCAAACC CACCCGCCCA GGGTGCCCCA (2) TGCACCGTGG 32.7 0.0327 P0.5 retina AAAAGCAAGA (2) AGGGCACTGG (2) GGCAGTCCCC GGGTGCCCCA (2) TGCACCGTGG 35.3 0.0353 P2.5 retina AAAAGCAAGA (2) AGGGCACTGG (2) GGCAGTCCCC GGGTGCCCCA (2) TGCACCGTGG 37 0.037 P4.5 retina AAAAGCAAGA (2) AGGGCACTGG (2) AGTTCAAACC GGGTGCCCCA (2) TGCACCGTGG 21.8 0.0218 P6.5 retina AAAAGCAAGA (2) AGGGCACTGG (2) GGCAGTCCCC GGGTGCCCCA (2) TGCACCGTGG 25 0.025 P10.5 crx- retina AAAAGCAAGA (2) AGGGCACTGG (2) AGTTCAAACC CAGAGCTGTG (3) GGGTGCCCCA (2) TGCACCGTGG 57.7 0.0577 P10.5 crx+ retina AAAAGCAAGA (2) AGGGCACTGG (2) GGGTGCCCCA (2) TGCACCGGGG TGCACCGTGG 36.4 0.0364 Adult retinal AAAAGCAAGA (2) AGGGCACTGG (2) CACCCGCCCA GGCAGTCCCC GGGTGCCCCA (2) TGCACCGGGG 35.4 0.0354 ONL AAAAGCAAGA (2) AGGGCACTGG (2) GGCAGTCCCC 15.3 0.0153