Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.44101	Atp1a3	ATPase, Na+/K+ transporting, alpha 3 polypeptide	7	7 5.5 cM	232975
Gene Ontology	ATP binding | ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | catalytic activity | cation transport | cytoplasm | hydrolase activity | hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | integral to membrane | magnesium ion binding | membrane | metabolism | monovalent inorganic cation transport | monovalent inorganic cation transporter activity | nucleus | plasma membrane | potassium ion transport | sodium ion transport
Human Homolog	ATP1A3[ATPase, Na+/K+ transporting, alpha 3 polypeptide]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 54 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCCCCCTCT (2) GGCATTTGCT (8) TACCCTCTCA 4.8 0.0048 Cb medulloblastoma CCACACAGCC GCCCCCCTCT (2) GGATTCCAAA GGCATTTGCT (8) 23.1 0.0231 P8 GC+1d culture AAAGAAAGAG (2) GCCCCCCTCT (2) GGCATTTGCT (8) GGGGCCGCCA (2) TACCCTCTCA 21.6 0.0216 P8 GC+SHH+1d culture AAAGAAAGAG (2) GCCCCCCTCT (2) GGATTCCAAA GGGGCCGCCA (2) 10.6 0.0106 E15 cortex GCCCCCCTCT (2) GGCATTTGCT (8) 64.3 0.0643 P1 cortex GCCCCCCTCT (2) GGCATTTGCT (8) 81.8 0.0818 Hypothalamus GCCCCCCTCT (2) GCCTACGGGC GGCATTTGCT (8) TACCCTCTCA 21.7 0.0217 E12.5 retina GGCATTTGCT (8) 1.9 0.0019 E16.5 retina GGATTCCAAA GGCATTTGCT (8) 3.6 0.0036 E18.5 retina GCCCCCCTCT (2) 1.8 0.0018 P0.5 retina AAAGAAAGAG (2) GCCCCCCTCT (2) TACCCTCTCA 7.9 0.0079 P2.5 retina GCCCCCCTCT (2) GGATTCCAAA TACCCTCTCA 14.2 0.0142 P4.5 retina GCCCCCCTCT (2) GGATTCCAAA GGGGCCGCCA (2) 17.9 0.0179 P6.5 retina GCCCCCCTCT (2) GCCTACGGGC GGCATTTGCT (8) 43.4 0.0434 P10.5 crx- retina AAAGAAAGAG (2) CCACACAGCC GCCCCCCTCT (2) GGCATTTGCT (8) 28 0.028 P10.5 crx+ retina GCCCCCCTCT (2) GGCATTTGCT (8) 32.6 0.0326 Adult retinal CCACACAGCC GCCCCCCTCT (2) GGATTCCAAA GGCATTTGCT (8) TACCCTCTCA 68.7 0.0687 ONL AAAGAAAGAG (2) GCCCCCCTCT (2) TACCCTCTCA 38.2 0.0382