Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.44183
BC006909
cDNA sequence BC006909
7
233895
Human Homolog
MGC3121[hypothetical protein MGC3121]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 42 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CACCACCACT
GGGAAGGTTT
(
2
)
16.3
0.0163
Cb medulloblastoma
GGGAAGGTTT
(
2
)
6.9
0.0069
P8 GC+1d culture
CACCACCACT
GGAAGCCAGG
GGGAAGGTTT
(
2
)
TGGCCCTGGT
14.7
0.0147
P8 GC+SHH+1d culture
CACCACCACT
GGGAAGGTTT
(
2
)
11.7
0.0117
3T3 fibroblasts
GGGAAGGTTT
(
2
)
3.5
0.0035
P1 cortex
CACCACCACT
GGGAAGGTTT
(
2
)
TGGCCCTGGT
13.5
0.0135
Hypothalamus
CACCACCACT
GGGAAGGTTT
(
2
)
TGGCCCTGGT
9
0.009
E12.5 retina
CACCACCACT
TGGCCCTGGT
7.5
0.0075
E14.5 retina
CACCACCACT
GGGAAGGTTT
(
2
)
7.2
0.0072
E16.5 retina
CACCACCACT
GGGAAGGTTT
(
2
)
3.6
0.0036
E18.5 retina
CACCACCACT
GGGAAGGTTT
(
2
)
12.8
0.0128
P0.5 retina
CACCACCACT
GGGAAGGTTT
(
2
)
7.8
0.0078
P2.5 retina
CACCACCACT
GGAAGCCAGG
GGGAAGGTTT
(
2
)
10.6
0.0106
P4.5 retina
CACCACCACT
GGGAAGGTTT
(
2
)
19.9
0.0199
P6.5 retina
CACCACCACT
GGAAGCCAGG
GGGAAGGTTT
(
2
)
16.7
0.0167
P10.5 crx- retina
CACCACCACT
GGGAAGGTTT
(
2
)
11.2
0.0112
P10.5 crx+ retina
CACCACCACT
GGGAAGGTTT
(
2
)
5.7
0.0057
Adult retinal
CACCACCACT
GGGAAGGTTT
(
2
)
18.6
0.0186
ONL
CACCACCACT
GGGAAGGTTT
(
2
)
9.5
0.0095
