| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GATATGTGTG TCCTTTTGTA
| 4.9 | 0.0049 |
| Cb medulloblastoma | ACACAGGCTT GAAGAGTTCT TCCTTTTGTA
| 6.9 | 0.0069 |
| P8 GC+1d culture | ACACAGGCTT ACAGACATTT (3) GATATGTGTG TCCTTTTGTA
| 6.8 | 0.0068 |
| P8 GC+SHH+1d culture | ACACAGGCTT GATATGTGTG GCCTAAGGAG TCCTTTTGTA
| 8.3 | 0.0083 |
| 3T3 fibroblasts | GCCTAAGGAG
| 7 | 0.007 |
| E15 cortex | GAAGAGTTCT GCCTAAGGAG TGCTGTCTCC
| 19.7 | 0.0197 |
| Hypothalamus | ACAGACATTT (3) GCCTAAGGAG TGCTGTCTCC
| 9 | 0.009 |
| E12.5 retina | ACAGACATTT (3)
| 3.8 | 0.0038 |
| E14.5 retina | ACAGACATTT (3) TCCTTTTGTA
| 7.2 | 0.0072 |
| E16.5 retina | ACACAGGCTT ACAGACATTT (3) GCCTAAGGAG TCCTTTTGTA
| 7.2 | 0.0072 |
| E18.5 retina | ACAGACATTT (3) TGCTGTCTCC
| 3.6 | 0.0036 |
| P0.5 retina | GATATGTGTG TCCTTTTGTA TGCTGTCTCC
| 7.9 | 0.0079 |
| P2.5 retina | TCCTTTTGTA TGCTGTCTCC
| 8.8 | 0.0088 |
| P4.5 retina | GAAGAGTTCT TCCTTTTGTA
| 9.9 | 0.0099 |
| P6.5 retina | TCCTTTTGTA
| 8.3 | 0.0083 |
| P10.5 crx- retina | ACACAGGCTT GCCTAAGGAG TCCTTTTGTA
| 5.7 | 0.0057 |
| P10.5 crx+ retina | ACACAGGCTT GCCTAAGGAG TCCTTTTGTA TGCTGTCTCC
| 13.4 | 0.0134 |
| Adult retinal | ACACAGGCTT
| 1.9 | 0.0019 |
| ONL | GCCTAAGGAG
| 1.9 | 0.0019 |