Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.44292	Tnrc4	trinucleotide repeat containing 4	3	3	78784
Gene Ontology	nucleic acid binding
Human Homolog	TNRC4[trinucleotide repeat containing 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 12 In Situ Hybridization Images

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SAGE Tags

Total 67 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACACAGGGCT (2) ACCACCAGGG (2) GCTCACTTTC GGGTGGGGTG 22.7 0.0227 Cb medulloblastoma GGGTGGGGTG 6.9 0.0069 P8 GC+1d culture ACACAGGGCT (2) ACCACCAGGG (2) GGGTGGGGTG TTTTTTTCCC (3) 33 0.033 P8 GC+SHH+1d culture ACACAGGGCT (2) ACCACCAGGG (2) GGGTGGGGTG 31.6 0.0316 3T3 fibroblasts ACACAGGGCT (2) ACCACCAGGG (2) 14 0.014 E15 cortex ACACAGGGCT (2) GGGTGGGGTG 9.8 0.0098 P1 cortex GGGTGGGGTG 18.2 0.0182 Hypothalamus ACACAGGGCT (2) ACCACCAGGG (2) GAGGGGCCAG GCTGCCATCA (2) GGGTGGGGTG 27.1 0.0271 E12.5 retina ACACAGGGCT (2) ACCACCAGGG (2) GCTCACTTTC GGGTGGGGTG TTTTTTTCCC (3) 20.7 0.0207 E14.5 retina ACACAGGGCT (2) GAGGGGCCAG GGGTGGGGTG TTTTTTTCCC (3) 25.5 0.0255 E16.5 retina ACACAGGGCT (2) CTCAGGGAAG GGGTGGGGTG 18.1 0.0181 E18.5 retina ACACAGGGCT (2) GGGTGGGGTG TTTTTTTCCC (3) 29 0.029 P0.5 retina ACCACCAGGG (2) GGGTGGGGTG TTTTTTTCCC (3) 35.4 0.0354 P2.5 retina ACACAGGGCT (2) ACCACCAGGG (2) GAGGGGCCAG GGGTGGGGTG 45.8 0.0458 P4.5 retina ACCACCAGGG (2) GGGTGGGGTG 57.5 0.0575 P6.5 retina ACACAGGGCT (2) ACCACCAGGG (2) CTCAGGGAAG GGGTGGGGTG TTTTTTTCCC (3) 106.7 0.1067 P10.5 crx- retina CTCAGGGAAG GAGGGGCCAG GCTGCCATCA (2) GGGTGGGGTG TTTTTTTCCC (3) 42.8 0.0428 P10.5 crx+ retina ACACAGGGCT (2) ACCACCAGGG (2) GGGTGGGGTG TTTTTTTCCC (3) 71 0.071 Adult retinal ACACAGGGCT (2) ACCACCAGGG (2) CTCAGGGAAG GCTGCCATCA (2) GGGTGGGGTG 28 0.028 ONL GGGTGGGGTG TTTTTTTCCC (3) 5.7 0.0057