Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.44359
5730557L09Rik
RIKEN cDNA 5730557L09 gene
1
108770
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 34 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGGCATAGGG
TATATATGTA (
5
)
3.2
0.0032
Cb medulloblastoma
GGGTTTGCAT
TTGGAAAATT
4.6
0.0046
P8 GC+1d culture
ATTGTCTTTT
(
2
)
GGGTTTGCAT
TATATATGTA (
5
)
4.5
0.0045
P8 GC+SHH+1d culture
GGGTTTGCAT
3.5
0.0035
3T3 fibroblasts
GGGCATAGGG
7
0.007
P1 cortex
ATTGTCTTTT
(
2
)
GGGTTTGCAT
TATATATGTA (
5
)
TTGTTTATAT
22.6
0.0226
Hypothalamus
TTGGAAAATT
3.6
0.0036
E12.5 retina
ATTGTCTTTT
(
2
)
GGGTTTGCAT
TATATATGTA (
5
)
5.7
0.0057
E14.5 retina
ATTGTCTTTT
(
2
)
TATATATGTA (
5
)
5.4
0.0054
E16.5 retina
ATTGTCTTTT
(
2
)
TATATATGTA (
5
)
5.4
0.0054
E18.5 retina
TATATATGTA (
5
)
1.8
0.0018
P0.5 retina
TATATATGTA (
5
)
2
0.002
P2.5 retina
TTGGAAAATT
1.8
0.0018
P4.5 retina
ATTGTCTTTT
(
2
)
GGGTTTGCAT
TATATATGTA (
5
)
9.9
0.0099
P10.5 crx- retina
ATTGTCTTTT
(
2
)
9.3
0.0093
P10.5 crx+ retina
ATTGTCTTTT
(
2
)
3.8
0.0038
Adult retinal
ATTGTCTTTT
(
2
)
TATATATGTA (
5
)
TTGTTTATAT
11.2
0.0112
ONL
ATTGTCTTTT
(
2
)
TTGTTTATAT
5.7
0.0057
