Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.44463	Zhx3	zinc fingers and homeoboxes 3	2		320799
Mm.44463	Plcg1	phospholipase C, gamma 1	2	2 92.0 cM	18803
Gene Ontology	calcium ion binding | cellular_component unknown | embryonic development (sensu Mammalia) | hydrolase activity | intracellular signaling cascade | lipid catabolism | lipid metabolism | phosphoinositide phospholipase C activity | phospholipase C activity | protein binding | signal transducer activity | signal transduction
Human Homolog	PLCG1[phospholipase C, gamma 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 131 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGGATGATTT (2) ATAAAAATAG (3) ATATGCAAAA CCATCAGTGG (2) GAAAAAAAAA (2) TCAAAAAAAA (2) TCCAAAAAAA (2) TCCTTAAAAA 79.8 0.0798 Cb medulloblastoma ATATGCAAAA CAGCCACACC GAAAAAAAAA (2) TCAAAAAAAA (2) TCCAAAAAAA (2) 286.6 0.2866 P8 GC+1d culture AGGATGATTT (2) ATAAAAATAG (3) ATATGCAAAA CATAAAAAAA (6) CCATCAGTGG (2) GAAAAAAAAA (2) TCAAAAAAAA (2) TCCAAAAAAA (2) TCCTTAAAAA TCCTTTTAAA (3) TCCTTTTTCA (2) TCCTTTTTCT (3) 85.6 0.0856 P8 GC+SHH+1d culture AGGATGATTT (2) ATATGCAAAA CCATCAGTGG (2) GAAAAAAAAA (2) TCAAAAAAAA (2) TCCAAAAAAA (2) TCCTTTTAAA (3) TCCTTTTTCT (3) 157 0.157 3T3 fibroblasts CCATCAGTGG (2) TCAAAAAAAA (2) 10.5 0.0105 E15 cortex ATAAAAATAG (3) GAAAAAAAAA (2) TCAAAAAAAA (2) 74.1 0.0741 P1 cortex ATAAAAATAG (3) CCATCAGTGG (2) GAAAAAAAAA (2) TCAAAAAAAA (2) TCCTTAAAAA 104.5 0.1045 Hypothalamus AGGATGATTT (2) ATAAAAATAG (3) ATATGCAAAA CATAAAAAAA (6) GAAAAAAAAA (2) TCAAAAAAAA (2) TCCAAAAAAA (2) TCCTTTTAAA (3) TCCTTTTTCT (3) 123 0.123 E12.5 retina AGGATGATTT (2) ATAAAAATAG (3) ATATGCAAAA CCATCAGTGG (2) GAAAAAAAAA (2) TCAAAAAAAA (2) TCCTTAAAAA 86.4 0.0864 E14.5 retina AACTGGGTTC (2) AGGATGATTT (2) ATAAAAATAG (3) ATATGCAAAA GAAAAAAAAA (2) TCAAAAAAAA (2) TCCTTTTAAA (3) TCCTTTTTCA (2) TCCTTTTTCT (3) 100 0.1 E16.5 retina AGGATGATTT (2) ATATGCAAAA GAAAAAAAAA (2) TCAAAAAAAA (2) TCCTTTTTCA (2) 47 0.047 E18.5 retina ATAAAAATAG (3) ATATGCAAAA CATAAAAAAA (6) GAAAAAAAAA (2) TCAAAAAAAA (2) TCCAAAAAAA (2) TCCTTAAAAA TCCTTTTTCT (3) 140.1 0.1401 P0.5 retina AACTGGGTTC (2) ATATGCAAAA CCATCAGTGG (2) GAAAAAAAAA (2) TCAAAAAAAA (2) TCCTTAAAAA 94.2 0.0942 P2.5 retina ATATGCAAAA CCATCAGTGG (2) GAAAAAAAAA (2) TCAAAAAAAA (2) TCCAAAAAAA (2) TCCTTAAAAA TCCTTTTTCT (3) 146.1 0.1461 P4.5 retina AGGATGATTT (2) ATATGCAAAA CCATCAGTGG (2) GAAAAAAAAA (2) TCAAAAAAAA (2) TCCAAAAAAA (2) TCCTTTTTCT (3) 110.9 0.1109 P6.5 retina ATAAAAATAG (3) ATATGCAAAA CAGCCACACC CATAAAAAAA (6) CCATCAGTGG (2) GAAAAAAAAA (2) TCAAAAAAAA (2) TCCAAAAAAA (2) TCCTTAAAAA TCCTTTTAAA (3) 90.2 0.0902 P10.5 crx- retina AGGATGATTT (2) CCATCAGTGG (2) GAAAAAAAAA (2) TCAAAAAAAA (2) TCCTTTTTCT (3) 37.3 0.0373 P10.5 crx+ retina ATATGCAAAA GAAAAAAAAA (2) TCAAAAAAAA (2) TCCTTTTTCT (3) 63.4 0.0634 Adult retinal ATATGCAAAA CAGCCACACC CCATCAGTGG (2) GAAAAAAAAA (2) TCAAAAAAAA (2) TCCAAAAAAA (2) 50.1 0.0501 ONL ATAAAAATAG (3) ATATGCAAAA CCATCAGTGG (2) GAAAAAAAAA (2) TCAAAAAAAA (2) 49.7 0.0497