Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.45047	Jmjd2b	jumonji domain containing 2B	17		193796
Gene Ontology	DNA binding | nucleic acid binding | regulation of transcription, DNA-dependent
Human Homolog	JMJD2B[jumonji domain containing 2B]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 64 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCCTCCTCCT GAGAGCCTGC (2) GGGCCTGGCC (2) TGGAAGAAAC (3) 16.3 0.0163 Cb medulloblastoma CCCTCCTCCT TCCCTGCTCT (3) TGGAAGAAAC (3) 43.9 0.0439 P8 GC+1d culture CCCTCCTCCT GAGAGCCTGC (2) GCCACCAGCC (5) TGGAAGAAAC (3) 17.1 0.0171 P8 GC+SHH+1d culture CCCTCCTCCT GAGAGCCTGC (2) GGGCCTGGCC (2) TGGAAGAAAC (3) TGTACTTGGA 16.5 0.0165 3T3 fibroblasts GAGAGCCTGC (2) GCCACCAGCC (5) TCCCTGCTCT (3) TGGAAGAAAC (3) 17.5 0.0175 E15 cortex CCCTCCTCCT 9.9 0.0099 P1 cortex CCCTCCTCCT GCCCCCACAA 9 0.009 Hypothalamus TCGCTGAAGT TGGAAGAAAC (3) 21.7 0.0217 E12.5 retina CCCTCCTCCT TGGAAGAAAC (3) 20.7 0.0207 E14.5 retina GAGAGCCTGC (2) GCCCCCACAA TCGCTGAAGT TGGAAGAAAC (3) 12.7 0.0127 E16.5 retina CCCTCCTCCT TCCCTGCTCT (3) TGGAAGAAAC (3) 21.7 0.0217 E18.5 retina CCCTCCTCCT GTGTCTCCCA TGGAAGAAAC (3) TGTACTTGGA 14.5 0.0145 P0.5 retina CCCTCCTCCT GAGAGCCTGC (2) TGGAAGAAAC (3) 13.8 0.0138 P2.5 retina CCCTCCTCCT GGGCCTGGCC (2) TCCCTGCTCT (3) TGGAAGAAAC (3) 16 0.016 P4.5 retina CCCTCCTCCT GAGAGCCTGC (2) TGGAAGAAAC (3) 19.8 0.0198 P6.5 retina CCCTCCTCCT GAGAGCCTGC (2) TGGAAGAAAC (3) 11.7 0.0117 P10.5 crx- retina GAGAGCCTGC (2) TGGAAGAAAC (3) 39 0.039 P10.5 crx+ retina CCCTCCTCCT GTGTCTCCCA TCGCTGAAGT TGGAAGAAAC (3) 21.1 0.0211 Adult retinal CCCTCCTCCT GAGAGCCTGC (2) GCCCCCACAA GTGTCTCCCA TGGAAGAAAC (3) 15 0.015 ONL TGGAAGAAAC (3) TGTACTTGGA 9.6 0.0096