Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4509	D930007N19Rik	RIKEN cDNA D930007N19 gene	17		106823
Mm.4509	9530072K05Rik	RIKEN cDNA 9530072K05 gene	17		78882
Mm.4509	Runx2	runt related transcription factor 2	17	17 28.07 cM	12393
Gene Ontology	ATP binding | cytoplasm | DNA binding | nucleus | odontogenesis (sensu Vertebrata) | positive regulation of transcription from Pol II promoter | protein binding | regulation of FGF receptor signaling pathway | regulation of odontogenesis (sensu Vertebrata) | regulation of transcription, DNA-dependent | skeletal development
Human Homolog	RUNX2[runt-related transcription factor 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 36 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CACCACCACC (4) GAATTTTATT (4) 22.8 0.0228 Cb medulloblastoma CACCACCACC (4) GAATTTTATT (4) 20.8 0.0208 P8 GC+1d culture CACCACCACC (4) GAATTTTATT (4) 3.4 0.0034 P8 GC+SHH+1d culture CACCACCACC (4) GAATTTTATT (4) 5.9 0.0059 3T3 fibroblasts CACCACCACC (4) 21 0.021 E15 cortex CACCACCACC (4) GAATTTTATT (4) TGTCCTGAAT (3) 24.6 0.0246 Hypothalamus CACCACCACC (4) GAATTTTATT (4) 9 0.009 E12.5 retina CACCACCACC (4) GAATTTTATT (4) 3.8 0.0038 E14.5 retina CACCACCACC (4) GAATTTTATT (4) 16.4 0.0164 E16.5 retina CACCACCACC (4) GAATTTTATT (4) 9 0.009 E18.5 retina CACCACCACC (4) GAATTTTATT (4) 10.9 0.0109 P0.5 retina CACCACCACC (4) GAATTTTATT (4) 9.8 0.0098 P2.5 retina CACCACCACC (4) GAATTTTATT (4) 5.3 0.0053 P4.5 retina CACCACCACC (4) GAATTTTATT (4) TGTCCTGAAT (3) 11.9 0.0119 P6.5 retina GAATTTTATT (4) 3.3 0.0033 P10.5 crx- retina CACCACCACC (4) GAATTTTATT (4) 9.3 0.0093 P10.5 crx+ retina CACCACCACC (4) GAATTTTATT (4) 19.2 0.0192 ONL CACCACCACC (4) GAATTTTATT (4) 3.8 0.0038