| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CAAACGACTA CCTTTAATCC (3) CTACTAACCC (5)
| 57.1 | 0.0571 |
| Cb medulloblastoma | CAAACGACTA CCTTTAATCC (3)
| 43.9 | 0.0439 |
| P8 GC+1d culture | CAAACGACTA CCTTTAATCC (3) TTTGATTTAT
| 41.1 | 0.0411 |
| P8 GC+SHH+1d culture | CAAACGACTA CCTTTAATCC (3) CTACTAACCC (5) TTTGATTTAT
| 42.2 | 0.0422 |
| 3T3 fibroblasts | CAAACGACTA CCTTTAATCC (3) CTACTAACCC (5)
| 77.1 | 0.0771 |
| E15 cortex | CCTTTAATCC (3)
| 54.4 | 0.0544 |
| P1 cortex | CAAACGACTA CCTTTAATCC (3)
| 172.7 | 0.1727 |
| Hypothalamus | CCTTTAATCC (3) TTTGATTTAT
| 27.1 | 0.0271 |
| E12.5 retina | CAAACGACTA CCTTTAATCC (3) TTTGATTTAT
| 84.5 | 0.0845 |
| E14.5 retina | CAAACGACTA CCTTTAATCC (3) TTTGATTTAT
| 149.4 | 0.1494 |
| E16.5 retina | CCTTTAATCC (3) TTTGATTTAT
| 86.9 | 0.0869 |
| E18.5 retina | CCTTTAATCC (3) TTTGATTTAT
| 27.2 | 0.0272 |
| P0.5 retina | CAAACGACTA CCTTTAATCC (3)
| 76.5 | 0.0765 |
| P2.5 retina | CAAACGACTA CCTTTAATCC (3) CTATATCCCT (2)
| 75.7 | 0.0757 |
| P4.5 retina | CAAACGACTA CCTTTAATCC (3)
| 47.6 | 0.0476 |
| P6.5 retina | CAAACGACTA CCTTTAATCC (3) CTACTAACCC (5)
| 76.7 | 0.0767 |
| P10.5 crx- retina | CCTTTAATCC (3) TTTGATTTAT
| 65.1 | 0.0651 |
| P10.5 crx+ retina | CCTTTAATCC (3) TTTGATTTAT
| 40.3 | 0.0403 |
| Adult retinal | CAAACGACTA CCTTTAATCC (3) CTATATCCCT (2)
| 137.1 | 0.1371 |
| ONL | CAAACGACTA CCTTTAATCC (3) CTATATCCCT (2)
| 90 | 0.09 |