Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4598	Bcan	brevican	3	3 42.7 cM	12032
Gene Ontology	cell adhesion | extracellular space | hyaluronic acid binding | sugar binding
Human Homolog	BCAN[brevican]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 32 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAAACAAAC (4) GGAGGAGGCT TCAGCTGCCT (2) 8.1 0.0081 Cb medulloblastoma GAAAACAAAC (4) GGAGGAGGCT TCAGCTGCCT (2) 25.4 0.0254 P8 GC+1d culture GAAAACAAAC (4) GGAGGAGGCT 4.5 0.0045 P8 GC+SHH+1d culture GGAGGAGGCT GGGAAGAGGA 5.9 0.0059 3T3 fibroblasts GGAGGAGGCT TCAGCTGCCT (2) 14 0.014 E15 cortex TCAGCTGCCT (2) 4.9 0.0049 P1 cortex TCAGCTGCCT (2) 4.5 0.0045 Hypothalamus CTTCCAGCCT GAAAACAAAC (4) GGAGGAGGCT GGGAAGAGGA TCAGCTGCCT (2) 16.2 0.0162 E12.5 retina GGAGGAGGCT 1.9 0.0019 E14.5 retina CTTCCAGCCT 1.8 0.0018 E18.5 retina CTTCCAGCCT GGAGGAGGCT 5.4 0.0054 P0.5 retina GGAGGAGGCT TCAGCTGCCT (2) 7.9 0.0079 P2.5 retina GGAGGAGGCT 5.3 0.0053 P4.5 retina GGAGGAGGCT 2 0.002 P6.5 retina GGAGGAGGCT GGGAAGAGGA 8.4 0.0084 P10.5 crx- retina GGAGGAGGCT 3.7 0.0037 P10.5 crx+ retina GGAGGAGGCT 3.8 0.0038 Adult retinal GGAGGAGGCT 14.8 0.0148