Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]
Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24

 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.4606 Bcat1branched chain aminotransferase 1, cytosolic 6  6 73.9 cM  12035 
 Gene Ontology branched chain family amino acid biosynthesis | branched chain family amino acid catabolism | branched chain family amino acid metabolism | branched-chain-amino-acid transaminase activity | branched-chain-amino-acid transaminase activity | catalytic activity | cytosol | metabolism | transaminase activity | transferase activity
 Human Homolog BCAT1[branched chain aminotransferase 1, cytosolic]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 61 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCATTTGTTTTT (2)
CAGGCAAAAT (2)
GAAATGACAG (2)
GGGAGCCCAA
22.90.0229
Cb medulloblastomaGAAGTGACAG (2)
9.20.0092
P8 GC+1d cultureATTTGTTTTT (2)
GAAATGACAG (2)
GGGAGCCCAA
90.009
P8 GC+SHH+1d cultureCAGGCAAAAT (2)
GAAATGACAG (2)
GAAGTGACAG (2)
GGGAGCCCAA
12.90.0129
3T3 fibroblastsGAAATGACAG (2)
GAAGTGACAG (2)
10.50.0105
E15 cortexGAAGTGACAG (2)
4.90.0049
P1 cortexGAAGTGACAG (2)
4.50.0045
HypothalamusGAAGTGACAG (2)
GGGAGCCCAA
7.20.0072
E12.5 retinaCAGGCAAAAT (2)
GAAGTGACAG (2)
GGGAGCCCAA
30.10.0301
E14.5 retinaCAGGCAAAAT (2)
GAAGTGACAG (2)
GGGAGCCCAA
TGTTACCAAA (2)
49.20.0492
E16.5 retinaCAGGCAAAAT (2)
GAAGTGACAG (2)
GGGAGCCCAA
27.10.0271
E18.5 retinaAGCCCTTCCC (4)
CAGGCAAAAT (2)
GAAGTGACAG (2)
34.60.0346
P0.5 retinaATTTGTTTTT (2)
CAGGCAAAAT (2)
GAAGTGACAG (2)
GGGAGCCCAA
25.60.0256
P2.5 retinaAGCCCTTCCC (4)
ATTTGTTTTT (2)
CAGGCAAAAT (2)
GAAGTGACAG (2)
GGGAGCCCAA
26.50.0265
P4.5 retinaAGCCCTTCCC (4)
CAGGCAAAAT (2)
GAAGTGACAG (2)
GGGAGCCCAA
59.50.0595
P6.5 retinaCAGGCAAAAT (2)
GAAGTGACAG (2)
GGGAGCCCAA
TGTTACCAAA (2)
26.70.0267
P10.5 crx- retinaGAAGTGACAG (2)
GGGAGCCCAA
TGTTACCAAA (2)
35.30.0353
P10.5 crx+ retinaAGCCCTTCCC (4)
CAGGCAAAAT (2)
GAAGTGACAG (2)
15.30.0153
Adult retinalCAGGCAAAAT (2)
GAAGTGACAG (2)
GGGAGCCCAA
9.40.0094
ONLATTTGTTTTT (2)
CAGGCAAAAT (2)
GAAGTGACAG (2)
GGGAGCCCAA
230.023