Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4636	Neurod1	neurogenic differentiation 1	2	2 C3 (2 46.0 cM)	18012
Gene Ontology	cell differentiation | development | DNA binding | eye morphogenesis | neurogenesis | nucleus | nucleus | regulation of transcription, DNA-dependent | transcriptional activator activity
Human Homolog	NEUROD1[neurogenic differentiation 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 4 In Situ Hybridization Images

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SAGE Tags

Total 80 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGTGCCCAGC CAGCTTCATC (2) CAGTTGCAAT GAATTCAAAG 213.7 0.2137 Cb medulloblastoma CAGCTTCATC (2) CAGTTGCAAT GAATTCAAAG GACAGCTCCC GGAAAGGTCA 117.9 0.1179 P8 GC+1d culture AATGCAGAGG AGTGCCCAGC CAGCTTCATC (2) CAGTTGCAAT CCCCCGCATC GAATTCAAAG GGAAAGGTCA TAATAAATCT 408.5 0.4085 P8 GC+SHH+1d culture AGTGCCCAGC CAGCTTCATC (2) CAGTTGCAAT CCCCCGCATC GAATTCAAAG GGAAAGGTCA 361.8 0.3618 E15 cortex AATGCAGAGG GAATTCAAAG 9.8 0.0098 P1 cortex GAATTCAAAG 4.5 0.0045 Hypothalamus CAGTTGCAAT GGAAAGGTCA 3.6 0.0036 E12.5 retina CAGCTTCATC (2) CAGTTGCAAT GAATTCAAAG 45.1 0.0451 E14.5 retina CAGCTTCATC (2) CAGTTGCAAT CCCCCGCATC GAATTCAAAG 29.1 0.0291 E16.5 retina AATGCAGAGG CAGCTTCATC (2) CAGTTGCAAT GAATTCAAAG TAATAAATCT 63.3 0.0633 E18.5 retina CAGCTTCATC (2) CAGTTGCAAT GGAAAGGTCA 83.6 0.0836 P0.5 retina AGTGCCCAGC CAGCTTCATC (2) CAGTTGCAAT GAATTCAAAG 58.9 0.0589 P2.5 retina AGTGCCCAGC CAGCTTCATC (2) CAGTTGCAAT GAATTCAAAG 225.3 0.2253 P4.5 retina CAGCTTCATC (2) CAGTTGCAAT GAATTCAAAG GACAGCTCCC 368.5 0.3685 P6.5 retina AATGCAGAGG CAGCTTCATC (2) CAGTTGCAAT CCCCCGCATC GAATTCAAAG GACAGCTCCC GGAAAGGTCA 255.2 0.2552 P10.5 crx- retina AGTGCCCAGC CAGCTTCATC (2) CAGTTGCAAT GAATTCAAAG GGAAAGGTCA 94.8 0.0948 P10.5 crx+ retina AATGCAGAGG CAGCTTCATC (2) CAGTTGCAAT 148 0.148 Adult retinal AGTGCCCAGC CAGCTTCATC (2) CAGTTGCAAT CCCCCGCATC GAATTCAAAG GGAAAGGTCA 96.4 0.0964 ONL AGTGCCCAGC CAGCTTCATC (2) CAGTTGCAAT GAATTCAAAG 89.9 0.0899