Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.46418	2200003E03Rik	RIKEN cDNA 2200003E03 gene	3		81600
Gene Ontology	carbohydrate metabolism | catalytic activity | chitin binding | chitin catabolism | chitin metabolism | chitinase activity | extracellular | hydrolase activity | hydrolase activity, acting on glycosyl bonds | metabolism | polysaccharide catabolism
Human Homolog	CHIA[eosinophil chemotactic cytokine]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 131 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACACACAAGA (3) AGTGGTGATG GAGGATTCCC GGCCCAATGA GTATTGGCCT GTCCCTGGGA GTGGGTTCCG (2) TGGTTTGTCT 50.5 0.0505 Cb medulloblastoma AACTATTTGG AATGGCTTTG (2) ACACACAAGA (3) GAGCCCAGGC GAGGATTCCC GGCCCAATGA GTATTGGCCT 48.4 0.0484 P8 GC+1d culture AATGGCTTTG (2) ACACACAAGA (3) GAGCCCAGGC GAGGATTCCC GGCCCAATGA GGCTCCTGGG (2) GGGGCCCCTT (2) GTATTGGCCT GTGGGTTCCG (2) TGGTTTGTCT 63.8 0.0638 P8 GC+SHH+1d culture AACTATTTGG ACACACAAGA (3) GAGGATTCCC GGCCCAATGA GTATTGGCCT GTCCCTGGGA GTGGGTTCCG (2) 48.2 0.0482 3T3 fibroblasts ACACACAAGA (3) GAGGATTCCC GGCCCAATGA 28 0.028 E15 cortex AACTATTTGG GAGGATTCCC GCTTCCTGGC (2) GGCCCAATGA GTATTGGCCT GTCCCTGGGA 59.1 0.0591 P1 cortex GAGGATTCCC GTATTGGCCT 31.8 0.0318 Hypothalamus AATGGCTTTG (2) ACACACAAGA (3) GAGGATTCCC GGCCCAATGA GTATTGGCCT GTCCTGGGGA GTGGGTTCCG (2) TGGTTTGTCT 68.8 0.0688 E12.5 retina AAACTAAAGG ACACACAAGA (3) GAGCCCAGGC GAGGATTCCC GGCCCAATGA GGGGCCCCTT (2) GTATTGGCCT 58.2 0.0582 E14.5 retina AACTATTTGG ACACACAAGA (3) GAGGATTCCC GGAAAGAACA (2) GGGACACAGG GTATTGGCCT 45.5 0.0455 E16.5 retina AAACTAAAGG ACACACAAGA (3) GAGGATTCCC GGCCCAATGA GTATTGGCCT GTCCCTGGGA 56.1 0.0561 E18.5 retina ACACACAAGA (3) GAGGATTCCC GTATTGGCCT GTCCCTGGGA TGGTTTGTCT 65.5 0.0655 P0.5 retina ACACACAAGA (3) GAGGATTCCC GCTTCCTGGC (2) GGGCCCTACC (2) GTATTGGCCT 39.4 0.0394 P2.5 retina ACACACAAGA (3) GAGCCCAGGC GAGGATTCCC GGCCCAATGA GGGACACAGG GTATTGGCCT TGGGTTCCAG 49.5 0.0495 P4.5 retina AACTATTTGG ACACACAAGA (3) AGTGGTGATG GAGGATTCCC GGCCCAATGA GTATTGGCCT GTCCCTGGGA GTGGGTTCCG (2) TGGTTTGTCT 61.6 0.0616 P6.5 retina ACACACAAGA (3) GAGGATTCCC GGCCCAATGA GTATTGGCCT GTGGGTTCCG (2) 41.7 0.0417 P10.5 crx- retina AACTATTTGG ACACACAAGA (3) GAGGATTCCC GGCCCAATGA GGGCCCTACC (2) 46.6 0.0466 P10.5 crx+ retina ACACACAAGA (3) GAGGATTCCC GGCCCAATGA GGGCCCTACC (2) GTATTGGCCT GTGGGTTCCG (2) TGGGTTCCAG 49.8 0.0498 Adult retinal ACACACAAGA (3) AGTGGTGATG GAGCCCAGGC GAGGATTCCC GCTTCCTGGC (2) GGAAAGAACA (2) GGCCCAATGA GGGGCCCCTT (2) GTATTGGCCT GTGGGTTCCG (2) TGGGTTCCAG 96.5 0.0965 ONL ACACACAAGA (3) GAGCCCAGGC GAGGATTCCC GGCCCAATGA GGGACACAGG GTATTGGCCT GTCCTGGGGA 53.5 0.0535