| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GCCTAACTCC TTTGTGTGTG
| 8.1 | 0.0081 |
| Cb medulloblastoma | ATTCTCCCTG (2) TTTGTGTGTG
| 4.6 | 0.0046 |
| P8 GC+1d culture | CTGGGTTGTG GAGCCAGATG (2) GCCTAACTCC
| 5.6 | 0.0056 |
| P8 GC+SHH+1d culture | CTGGGTTGTG GCCTAACTCC TTTGTGTGTG
| 9.4 | 0.0094 |
| 3T3 fibroblasts | CTGGGTTGTG
| 3.5 | 0.0035 |
| E15 cortex | GCCTAACTCC
| 4.9 | 0.0049 |
| P1 cortex | GCCTAACTCC TTTGTGTGTG
| 9 | 0.009 |
| Hypothalamus | CTGGGTTGTG
| 1.8 | 0.0018 |
| E12.5 retina | GAGCCAGATG (2) GCCTAACTCC TTTGTGTGTG
| 7.6 | 0.0076 |
| E14.5 retina | GCCTAACTCC
| 1.8 | 0.0018 |
| E16.5 retina | AGGCCTGGAA CTGGGTTGTG
| 5.4 | 0.0054 |
| E18.5 retina | ATTCTCCCTG (2) GCCTAACTCC
| 5.4 | 0.0054 |
| P0.5 retina | ATTCTCCCTG (2) GAGCCAGATG (2)
| 7.9 | 0.0079 |
| P2.5 retina | AGCTGTGTGG ATTCTCCCTG (2) CTGGGTTGTG GCCTAACTCC TTTGTGTGTG
| 10.7 | 0.0107 |
| P4.5 retina | GCCTAACTCC TTTGTGTGTG
| 4 | 0.004 |
| P6.5 retina | ATTCTCCCTG (2)
| 1.7 | 0.0017 |
| P10.5 crx- retina | AGCTGTGTGG ATTCTCCCTG (2) CTGGGTTGTG GCCTAACTCC
| 15 | 0.015 |
| P10.5 crx+ retina | AGGCCTGGAA
| 3.8 | 0.0038 |
| Adult retinal | ATTCTCCCTG (2) CTGGGTTGTG GCCTAACTCC TTTGTGTGTG
| 9.4 | 0.0094 |
| ONL | AGCTGTGTGG ATTCTCCCTG (2) TTTGTGTGTG
| 9.5 | 0.0095 |