Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.46484	Urod	uroporphyrinogen decarboxylase	4	4 50.6 cM	22275
Gene Ontology	carboxy-lyase activity | heme biosynthesis | lyase activity | porphyrin biosynthesis | uroporphyrinogen decarboxylase activity
Human Homolog	UROD[uroporphyrinogen decarboxylase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 77 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGTCTTGAG (2) CCTTTCTGCT (2) CTCCCACCTT (3) GTACCTGCCA TTCTTTTGTA 19.6 0.0196 Cb medulloblastoma CCTTTCTGCT (2) CTCCCACCTT (3) GGTTGTAAGG GTACCTGCCA 20.8 0.0208 P8 GC+1d culture CAGTCTTGAG (2) CCTTTCTGCT (2) CTCCCACCTT (3) GTACCTGCCA TTCTTTTGTA 18.2 0.0182 P8 GC+SHH+1d culture CAGTCTTGAG (2) CCTTTCTGCT (2) CTCCCACCTT (3) GAGAGGTCAG GGCTTTACCC (2) GGTTGTAAGG GTACCTGCCA 29.4 0.0294 3T3 fibroblasts CAGTCTTGAG (2) CTCCCACCTT (3) 24.5 0.0245 E15 cortex CTCCCACCTT (3) GTACCTGCCA 24.7 0.0247 P1 cortex CAGTCTTGAG (2) GTACCTGCCA 22.7 0.0227 Hypothalamus CAGTCTTGAG (2) CCTTTCTGCT (2) CTCCCACCTT (3) 12.7 0.0127 E12.5 retina CAGTCTTGAG (2) CCTTTCTGCT (2) CTCCCACCTT (3) 15.1 0.0151 E14.5 retina CCTTTCTGCT (2) CTCCCACCTT (3) GTACCTGCCA 20.1 0.0201 E16.5 retina CCTTTCTGCT (2) CTCCCACCTT (3) GTACCTGCCA 19.9 0.0199 E18.5 retina CAGTCTTGAG (2) CCTTTCTGCT (2) CTCCCACCTT (3) GGCTTTACCC (2) GTACCTGCCA 23.6 0.0236 P0.5 retina CAGTCTTGAG (2) CCTTTCTGCT (2) CTCCCACCTT (3) GGTTGTAAGG GTACCTGCCA TTCTTTTGTA 35.4 0.0354 P2.5 retina CCTTTCTGCT (2) CTCCCACCTT (3) GTACCTGCCA 26.3 0.0263 P4.5 retina CCTTTCTGCT (2) CTCCCACCTT (3) GTACCTGCCA 49.5 0.0495 P6.5 retina CAGTCTTGAG (2) CCTTTCTGCT (2) CTCCCACCTT (3) GTACCTGCCA 38.3 0.0383 P10.5 crx- retina CAGTCTTGAG (2) CCTTTCTGCT (2) CTCCCACCTT (3) 20.5 0.0205 P10.5 crx+ retina CAGTCTTGAG (2) CCTTTCTGCT (2) CTCCCACCTT (3) GAGAGGTCAG GTACCTGCCA 40.3 0.0403 Adult retinal CAGTCTTGAG (2) CCTTTCTGCT (2) CTCCCACCTT (3) GTACCTGCCA 44.6 0.0446 ONL CCTTTCTGCT (2) CTCCCACCTT (3) GAGAGGTCAG GGCTTTACCC (2) TTCTTTTGTA 24.8 0.0248