Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.46754	Slc38a2	solute carrier family 38, member 2	15		67760
Human Homolog	SLC38A2[solute carrier family 38, member 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 107 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATTAATCAAA (3) ATTAATCAAT GCAACAAGGC GCTAATACTG (4) GGCTTGATTG (3) GGGACAACCA GGTTTTGTTT GTTTTGTTTT (2) TGGTAGCTAC TTTGGCTGTT TTTTGAGTTT (3) 52 0.052 Cb medulloblastoma ATTAATCAAA (3) GCTGACACAG GGTTTTGTTT TGGTAGCTAC TTCTGAGTCT 27.7 0.0277 P8 GC+1d culture ATTAATCAAA (3) GGGACAACCA GGTTTTGTTT TAACAATAAT TTCTGAGTCT TTGGCTGTCC 13.7 0.0137 P8 GC+SHH+1d culture ATTAATCAAA (3) ATTAATCAAT CCTCTGTGGC GAACGTTTCA GGCTTGATTG (3) GGGACAACCA GGTTTTGTTT GTTTTGTTTT (2) GTTTTTGTTA (3) TAACAATAAT TTCTGAGTCT TTGGCTGTCC TTTTGAGTTT (3) 36.3 0.0363 E15 cortex GGTTTTGTTT 9.9 0.0099 P1 cortex ATTAATCAAA (3) GCTAATACTG (4) GGTTTTGTTT TTCTGAGTCT 31.7 0.0317 Hypothalamus ATTAATCAAA (3) GAACGTTTCA GTTTTTGTTA (3) TTCTGAGTCT TTTGGCTGTT TTTTGAGTTT (3) 12.6 0.0126 E12.5 retina ATTAATCAAA (3) ATTAATCAAT GGCTTGATTG (3) GGTTTTGTTT GTTTTGTTTT (2) TTGGCTGTCC 39.6 0.0396 E14.5 retina ATTAATCAAA (3) ATTAATCAAT GCTAATACTG (4) GGTTTTGTTT 30.9 0.0309 E16.5 retina ATTAATCAAA (3) ATTAATCAAT GAACGTTTCA GCTGACACAG GGTTTTGTTT TTGGCTGTCC 25.3 0.0253 E18.5 retina ATTAATCAAA (3) ATTAATCAAT GCTGACACAG GGTTTTGTTT TGGTAGCTAC 45.4 0.0454 P0.5 retina ATTAATCAAA (3) ATTAATCAAT GGTTTTGTTT 21.7 0.0217 P2.5 retina ATTAATCAAA (3) ATTAATCAAT GGGACAACCA GGTTTTGTTT GTTTTTGTTA (3) TTGGCTGTCC TTTGGCTGTT 30 0.03 P4.5 retina ATTAATCAAA (3) ATTAATCAAT GGCTTGATTG (3) GGTTTTGTTT TTCTGAGTCT TTTTGAGTTT (3) 21.9 0.0219 P6.5 retina ATTAATCAAA (3) GAACGTTTCA GCAACAAGGC GGTTTTGTTT GTTTTGTTTT (2) GTTTTTGTTA (3) TTCTGAGTCT 26.7 0.0267 P10.5 crx- retina ATTAATCAAA (3) ATTAATCAGT GGTTTTGTTT 22.4 0.0224 P10.5 crx+ retina ATTAATCAGT CCTCTGTGGC GCTAATACTG (4) GGGACAACCA GGTTTTGTTT 21.1 0.0211 Adult retinal ATTAATCAAA (3) ATTAATCAAT GCTGACACAG GGGACAACCA GTTTTGTTTT (2) TTCTGAGTCT 13.2 0.0132 ONL ATTAATCAAA (3) GGTTTTGTTT GTTTTGTTTT (2) 9.5 0.0095