Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.48638	Prkaa2	protein kinase, AMP-activated, alpha 2 catalytic subunit	4		108079
Gene Ontology	ATP binding | kinase activity | nucleus | protein serine/threonine kinase activity | response to stress | SNF1A/AMP-activated protein kinase activity | transferase activity
Human Homolog	PRKAA2[protein kinase, AMP-activated, alpha 2 catalytic subunit]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 32 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CATATTCCTC 1.6 0.0016 Cb medulloblastoma GCTGAGAAGC (4) TGTGCTAATA 4.6 0.0046 P8 GC+1d culture GCTGAGAAGC (4) TTTTCTAAAT (3) 2.2 0.0022 P8 GC+SHH+1d culture GGCTTCGAAT TGTGCTAATA TTTTCTAAAT (3) 8.3 0.0083 E15 cortex GGCGGGATGA 9.9 0.0099 Hypothalamus GGCGGGATGA GGCTTCGAAT TGTGCTAATA 5.4 0.0054 E12.5 retina CATATTCCTC 1.9 0.0019 E14.5 retina TTTTCTAAAT (3) 1.8 0.0018 E16.5 retina GGCGGGATGA TGTGCTAATA 3.6 0.0036 E18.5 retina TTTTCTAAAT (3) 1.8 0.0018 P0.5 retina GGCGGGATGA TGTGCTAATA 5.9 0.0059 P2.5 retina TGTGCTAATA TTTTCTAAAT (3) 7 0.007 P4.5 retina CATATTCCTC 2 0.002 P6.5 retina CATATTCCTC TGTGCTAATA TTTTCTAAAT (3) 5.1 0.0051 P10.5 crx- retina GCTGAGAAGC (4) GGCTTCGAAT 3.8 0.0038 P10.5 crx+ retina GGCTTCGAAT TTTTCTAAAT (3) 5.7 0.0057 ONL GCTGAGAAGC (4) GGCTTCGAAT TTTTCTAAAT (3) 5.7 0.0057