Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.5021	Ddr1	discoidin domain receptor family, member 1	17	17 C (17 21.5 cM)	12305
Gene Ontology	ATP binding | cell adhesion | extracellular space | integral to membrane | kinase activity | membrane | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | receptor activity | transferase activity | transmembrane receptor protein tyrosine kinase activity | transmembrane receptor protein tyrosine kinase signaling pathway
Human Homolog	DDR1[discoidin domain receptor family, member 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 12 In Situ Hybridization Images

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SAGE Tags

Total 91 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGTTATTTT (4) CTGCAGCTAG GATTCAATTA GCTGCTGGTG (3) GGCAGCACAA 68.5 0.0685 Cb medulloblastoma CAGTTATTTT (4) GATTCAATTA GCTGCTGGTG (3) GGCAGCACAA 48.5 0.0485 P8 GC+1d culture AATGGCTGCT CAGTTATTTT (4) CTACAGCTAG CTGCAGCTAG GCTGCTGGTG (3) GGCAGCACAA 46.7 0.0467 P8 GC+SHH+1d culture CAGTTATTTT (4) CTACAGCTAG CTGCAGCTAG GCTGCTGGTG (3) GGCAGCACAA GGGGTAAGAA 52.6 0.0526 3T3 fibroblasts GCTGCTGGTG (3) GGCAGCACAA 42.1 0.0421 E15 cortex ATGGAAATGG CTGCAGCTAG GCTGCTGGTG (3) GGCAGCACAA 64.3 0.0643 P1 cortex GCTGCTGGTG (3) GGCAGCACAA 113.6 0.1136 Hypothalamus GCTGCTGGTG (3) GGCAGCACAA 29 0.029 E12.5 retina CTGCAGCTAG GCTGCTGGTG (3) GGCAGCACAA 39.4 0.0394 E14.5 retina AATGGCTGCT CTGCAGCTAG GAGGGAGAGA GCTGCTGGTG (3) GGCAGCACAA 38.3 0.0383 E16.5 retina AATGGCTGCT CTGCAGCTAG GAGGGAGAGA GCAGGTGAGA GCTGCTGGTG (3) GGCAGCACAA GGGGTAAGAA 38 0.038 E18.5 retina CTGCAGCTAG GCTGCTGGTG (3) GGACTCCTGG GGCAGCACAA 96.4 0.0964 P0.5 retina AATGGCTGCT ATGGAAATGG CGTCTGGGAG CTGCAGCTAG GCTGCTGGTG (3) GGCAGCACAA GGGGTAAGAA 47.1 0.0471 P2.5 retina AATGGCTGCT CAGTTATTTT (4) CTGCAGCTAG GATTCAATTA GCTGCTGGTG (3) GGCAGCACAA 59.8 0.0598 P4.5 retina AATGGCTGCT CTGCAGCTAG GCAGGTGAGA GCTGCTGGTG (3) GGCAGCACAA 71.4 0.0714 P6.5 retina AATGGCTGCT CAGTTATTTT (4) CTGCAGCTAG GAGGGAGAGA GCAGGTGAGA GCTGCTGGTG (3) GGACTCCTGG GGCAGCACAA 65 0.065 P10.5 crx- retina CGTCTGGGAG CTACAGCTAG GCTGCTGGTG (3) GGACTCCTGG GGCAGCACAA GGGGTAAGAA 39.1 0.0391 P10.5 crx+ retina CTACAGCTAG GCTGCTGGTG (3) GGCAGCACAA 55.7 0.0557 Adult retinal CTGCAGCTAG GCTGCTGGTG (3) GGCAGCACAA 25.9 0.0259 ONL CTGCAGCTAG GCTGCTGGTG (3) GGCAGCACAA 42.1 0.0421