| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GCGTAACTCC TGGGTGCTGG (2) TGGTTGTTGG (2) TTGGCCAAGT (3)
| 14.7 | 0.0147 |
| Cb medulloblastoma | CGCTCCAGCC TGGGTGCTGG (2)
| 11.5 | 0.0115 |
| P8 GC+1d culture | ACATAAAAAA (2) CGCTCCAGCC GTGACCCACA TGGGTGCTGG (2) TGGTTGTTGG (2) TTTTAAAGCA
| 12.4 | 0.0124 |
| P8 GC+SHH+1d culture | CGCTCCAGCC GGTGACCAGG TGGGTGCTGG (2) TGGTTGTTGG (2)
| 7.1 | 0.0071 |
| 3T3 fibroblasts | CTTGTGCACA (2) TGGGTGCTGG (2)
| 28 | 0.028 |
| E15 cortex | TGGGTGCTGG (2) TGGTTGTTGG (2)
| 19.7 | 0.0197 |
| P1 cortex | CCATCCAAAG TGGGTGCTGG (2) TGGTTGTTGG (2)
| 27.2 | 0.0272 |
| Hypothalamus | CCATCCAAAG CGCTCCAGCC TGGGTGCTGG (2) TGGTTGTTGG (2) TTTTAAAGCA
| 38 | 0.038 |
| E12.5 retina | CGCTCCAGCC GATACAGCCA TGGGTGCTGG (2) TGGTTGTTGG (2) TTTTAAAGCA
| 24.4 | 0.0244 |
| E14.5 retina | GATACAGCCA TGGGTGCTGG (2) TGGTTGTTGG (2) TTGGCCAAGT (3) TTTTAAAGCA
| 98.4 | 0.0984 |
| E16.5 retina | CCATCCAAAG CGCTCCAGCC GTGACCCACA TGGGTGCTGG (2) TGGTTGTTGG (2) TTTTAAAGCA
| 65.2 | 0.0652 |
| E18.5 retina | ACATAAAAAA (2) GTGACCCACA TGGGTGCTGG (2) TGGTTGTTGG (2)
| 30.9 | 0.0309 |
| P0.5 retina | CGCTCCAGCC GGTGACCAGG TGGGTGCTGG (2)
| 19.7 | 0.0197 |
| P2.5 retina | CGCTCCAGCC TGGGTGCTGG (2) TGGTTGTTGG (2)
| 26.4 | 0.0264 |
| P4.5 retina | CGCTCCAGCC CTTGTGCACA (2) GCGTAACTCC TGGGTGCTGG (2) TGGTTGTTGG (2) TTGGCCAAGT (3)
| 33.8 | 0.0338 |
| P6.5 retina | CGCTCCAGCC GCGTAACTCC TGGGTGCTGG (2) TGGTTGTTGG (2) TTTTAAAGCA
| 23.4 | 0.0234 |
| P10.5 crx- retina | CGCTCCAGCC GATACAGCCA GGTGACCAGG TGGGTGCTGG (2) TGGTTGTTGG (2)
| 33.5 | 0.0335 |
| P10.5 crx+ retina | CCATCCAAAG TGGGTGCTGG (2) TGGTTGTTGG (2) TTTTAAAGCA
| 23 | 0.023 |
| Adult retinal | CGCTCCAGCC TGGGTGCTGG (2) TGGTTGTTGG (2)
| 24.1 | 0.0241 |
| ONL | TGGGTGCTGG (2) TGGTTGTTGG (2)
| 51.7 | 0.0517 |