Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.5083	Rab3a	RAB3A, member RAS oncogene family	8	8 32.6 cM	19339
Gene Ontology	exocytosis | GTP binding | GTPase activity | intracellular protein transport | protein binding | protein transport | protein transporter activity | regulation of exocytosis | small GTPase mediated signal transduction | synaptic vesicle | transport
Human Homolog	RAB3A[RAB3A, member RAS oncogene family]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 53 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGCCCTCTG (2) AGGTTTTTGT (3) ATTCCGAATT (2) GAAGATGAGC (2) GCCCAGAGCT 16.2 0.0162 Cb medulloblastoma AAGCCCTCTG (2) 4.6 0.0046 P8 GC+1d culture AAGCCCTCTG (2) AGACCCTGCC AGGTTTTTGT (3) GAAGATGAGC (2) 22.7 0.0227 P8 GC+SHH+1d culture AAGCCCTCTG (2) GAAGATGAGC (2) 11.8 0.0118 3T3 fibroblasts AAGCCCTCTG (2) AGACCCTGCC 7 0.007 E15 cortex AAGCCCTCTG (2) GAAGATGAGC (2) 14.8 0.0148 P1 cortex GAAGATGAGC (2) 13.6 0.0136 Hypothalamus AAGCCCTCTG (2) GAAGATGAGC (2) GCCCAGAGCT 21.8 0.0218 E12.5 retina AGGTTTTTGT (3) 1.9 0.0019 E14.5 retina AAGCCCTCTG (2) GAAGATGAGC (2) GCCCAGAGCT 7.2 0.0072 E16.5 retina AAGCCCTCTG (2) AGACCCTGCC 3.6 0.0036 E18.5 retina GAAGATGAGC (2) 1.8 0.0018 P0.5 retina GAAGATGAGC (2) 9.8 0.0098 P2.5 retina AGACCCTGCC AGGTTTTTGT (3) GAAGATGAGC (2) 7.1 0.0071 P4.5 retina AAGCCCTCTG (2) AGACCCTGCC ATTCCGAATT (2) GAAGATGAGC (2) 13.9 0.0139 P6.5 retina AAGCCCTCTG (2) ATTCCGAATT (2) GAAGATGAGC (2) 13.3 0.0133 P10.5 crx- retina AAGCCCTCTG (2) ACGTCAGAAC AGACCCTGCC GAAGATGAGC (2) 18.6 0.0186 P10.5 crx+ retina AAGCCCTCTG (2) ACGTCAGAAC AGACCCTGCC 9.5 0.0095 Adult retinal AAGCCCTCTG (2) AGACCCTGCC AGGTTTTTGT (3) GAAGATGAGC (2) 22.3 0.0223 ONL AAGCCCTCTG (2) AGACCCTGCC ATTCCGAATT (2) GAAGATGAGC (2) 15.3 0.0153