Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.5121	Pam	peptidylglycine alpha-amidating monooxygenase	1	1 57.5 cM	18484
Gene Ontology	copper ion binding | cytosol | extracellular space | integral to membrane | integral to plasma membrane | membrane | monooxygenase activity | oxidoreductase activity | peptide metabolism | peptidylglycine monooxygenase activity
Human Homolog	PAM[peptidylglycine alpha-amidating monooxygenase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 61 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  Cb medulloblastoma CTTGCAATCT GTAGCGCTCA TAAAGCAAAA (3) TGCTCTGCCT (2) 41.5 0.0415 P8 GC+1d culture CAGTGTCTTT CTTGCAATCT TAAAGCAAAA (3) TGCTCTGCCT (2) 19.4 0.0194 P8 GC+SHH+1d culture CAGTGTCTTT CTTGCAATCT GTAGCGCTCA TAAAGCAAAA (3) TGCTCTGCCT (2) 23.5 0.0235 3T3 fibroblasts TGCTCTGCCT (2) 3.5 0.0035 E15 cortex GTAGCGCTCA TGCTCTGCCT (2) 19.7 0.0197 P1 cortex TGCTCTGCCT (2) 22.7 0.0227 Hypothalamus CAGTGTCTTT GGCATCACAA GTAGCGCTCA TAAAGCAAAA (3) TGCTCTGCCT (2) 34.3 0.0343 E12.5 retina AGGAAGGGGG (2) TGCTCTGCCT (2) 3.8 0.0038 E14.5 retina CTTGCAATCT TAAAGCAAAA (3) TGCTCTGCCT (2) 9.1 0.0091 E16.5 retina TGCTCTGCCT (2) 3.6 0.0036 E18.5 retina AGGAAGGGGG (2) CAGTGTCTTT TAAAGCAAAA (3) TGCTCTGCCT (2) 32.7 0.0327 P0.5 retina TAAAGCAAAA (3) TGCTCTGCCT (2) 7.8 0.0078 P2.5 retina AGGAAGGGGG (2) CTTGCAATCT TAAAGCAAAA (3) TGCTCTGCCT (2) 21.2 0.0212 P4.5 retina AGGAAGGGGG (2) CTTGCAATCT TAAAGCAAAA (3) TGCTCTGCCT (2) 41.7 0.0417 P6.5 retina CTTGCAATCT TAAAGCAAAA (3) TGCTCTGCCT (2) 10 0.01 P10.5 crx- retina AGGAAGGGGG (2) CAGTGTCTTT CTTGCAATCT TAAAGCAAAA (3) TGCTCTGCCT (2) 13.1 0.0131 P10.5 crx+ retina AGGAAGGGGG (2) CAGTGTCTTT TAAAGCAAAA (3) TGCTCTGCCT (2) 42.3 0.0423 Adult retinal CAGTGTCTTT GGCATCACAA GTAGCGCTCA TAAAGCAAAA (3) TGCTCTGCCT (2) 57.6 0.0576 ONL CTTGCAATCT TAAAGCAAAA (3) 28.7 0.0287