| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GTGCCATAAG
| 1.6 | 0.0016 |
| Cb medulloblastoma | GTGCCATAAG TGTTACTTTT (2) TTTTACTTTT
| 9.2 | 0.0092 |
| P8 GC+1d culture | GATTGTGGGC GTGCCATAAG TGTTACTTTT (2)
| 9.1 | 0.0091 |
| P8 GC+SHH+1d culture | CGCTGGATGA (5) GTGCCATAAG TTCAACTTTT (2) TTTTACTTTT
| 8.3 | 0.0083 |
| 3T3 fibroblasts | CGCTGGATGA (5)
| 3.5 | 0.0035 |
| E15 cortex | CGCTGGATGA (5)
| 4.9 | 0.0049 |
| P1 cortex | GTGCCATAAG TTTTACTTTT
| 9 | 0.009 |
| Hypothalamus | CGCTGGATGA (5) GAAGATATGA GATTGTGGGC GTGCCATAAG
| 12.6 | 0.0126 |
| E12.5 retina | TGTTACTTTT (2)
| 3.8 | 0.0038 |
| E14.5 retina | CGCTGGATGA (5) GAAGATATGA GTGCCATAAG
| 7.2 | 0.0072 |
| E16.5 retina | AATTATGGAA (5) CGCTGGATGA (5)
| 5.4 | 0.0054 |
| E18.5 retina | GTGCCATAAG TCTCAAACAA TGTTACTTTT (2)
| 7.2 | 0.0072 |
| P0.5 retina | CGCTGGATGA (5) GTGCCATAAG TGTTACTTTT (2)
| 9.8 | 0.0098 |
| P2.5 retina | AATTATGGAA (5) CGCTGGATGA (5) GATTGTGGGC GTGCCATAAG TGTTACTTTT (2) TTCAACTTTT (2) TTTTACTTTT
| 16 | 0.016 |
| P4.5 retina | GTGCCATAAG
| 7.9 | 0.0079 |
| P6.5 retina | GTGCCATAAG TCTCAAACAA TGTTACTTTT (2)
| 5.1 | 0.0051 |
| P10.5 crx- retina | AATTATGGAA (5) CGCTGGATGA (5) GTGCCATAAG TCTCAAACAA
| 9.4 | 0.0094 |
| P10.5 crx+ retina | CGCTGGATGA (5) GTGCCATAAG TGTTACTTTT (2) TTTTACTTTT
| 11.4 | 0.0114 |
| Adult retinal | CGCTGGATGA (5) GTGCCATAAG TTCAACTTTT (2)
| 7.5 | 0.0075 |
| ONL | GAAGATATGA GTGCCATAAG
| 3.8 | 0.0038 |