Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.57035	Itga3	integrin alpha 3	11	11 56.0 cM	16400
Gene Ontology	basolateral plasma membrane | cell adhesion | cell-matrix adhesion | fusion of sperm to egg plasma membrane | integral to membrane | integrin complex | integrin-mediated signaling pathway | memory | neuronal migration | protein binding | synaptosome
Human Homolog	ITGA3[integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 26 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGGGCAGTG (2) 1.6 0.0016 Cb medulloblastoma GAGACAAGAC 2.3 0.0023 P8 GC+1d culture GCAGGGGAGG 1.1 0.0011 P8 GC+SHH+1d culture GCAGGGGAGG 1.2 0.0012 3T3 fibroblasts GAGACAAGAC 7 0.007 E15 cortex GTGGCCAACG (2) 4.9 0.0049 Hypothalamus GCAGGGGAGG GTGGGCAGTG (2) 7.2 0.0072 E12.5 retina GTGGGCAGTG (2) 3.8 0.0038 E14.5 retina GTGGCCAACG (2) GTGGGCAGTG (2) 3.6 0.0036 E16.5 retina GAGACAAGAC GTGGCCAACG (2) GTGGGCAGTG (2) 5.4 0.0054 E18.5 retina GCAGGGGAGG GTGGGCAGTG (2) 3.6 0.0036 P2.5 retina GTGGGCAGTG (2) 3.5 0.0035 P4.5 retina GAGACAAGAC GCAGGGGAGG GTGGGCAGTG (2) 11.9 0.0119 P6.5 retina GCAGGGGAGG 5 0.005 P10.5 crx- retina GCAGGGGAGG GTGGGCAGTG (2) 5.6 0.0056 P10.5 crx+ retina GCAGGGGAGG GTGGGCAGTG (2) 9.6 0.0096 ONL GTGGGCAGTG (2) 1.9 0.0019