Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.6276
U2af1-rs2
U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1, related sequence 2
X
X 68.5 cM
22184
Mm.6276
A230052C13Rik
RIKEN cDNA A230052C13 gene
X
368205
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 31 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ATACTTTTCA (
5
)
CACAGCTCAA
3.2
0.0032
Cb medulloblastoma
ATCAGAATAT
(
3
)
CACAGCTCAA
4.6
0.0046
P8 GC+1d culture
ATACTTTTCA (
5
)
CACAGCTCAA
GGGGTGAGGA
(
2
)
5.7
0.0057
P8 GC+SHH+1d culture
ATCAGAATAT
(
3
)
CACAGCTCAA
GGGGTGAGGA
(
2
)
4.7
0.0047
P1 cortex
AAGAATGGTT
(
2
)
CACAGCTCAA
TATATGAATG
(
2
)
18.1
0.0181
Hypothalamus
AAGAATGGTT
(
2
)
CACAGCTCAA
12.7
0.0127
E12.5 retina
GGGGTGAGGA
(
2
)
1.9
0.0019
E16.5 retina
TATATGAATG
(
2
)
1.8
0.0018
E18.5 retina
AAGAATGGTT
(
2
)
CACAGCTCAA
TCTGTTCATT
5.4
0.0054
P2.5 retina
ATCAGAATAT
(
3
)
CACAGCTCAA
TATATGAATG
(
2
)
TCTGTTCATT
7.2
0.0072
P4.5 retina
TATATGAATG
(
2
)
2
0.002
P6.5 retina
TCTGTTCATT
1.7
0.0017
P10.5 crx- retina
TATATGAATG
(
2
)
1.9
0.0019
P10.5 crx+ retina
CACAGCTCAA
3.8
0.0038
ONL
AAGAATGGTT
(
2
)
ATCAGAATAT
(
3
)
CACAGCTCAA
7.6
0.0076
