Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.63068	Ss18l1	synovial sarcoma translocation gene on chromosome 18-like 1	2		269397
Gene Ontology	dendrite morphogenesis | DNA binding | protein binding | regulation of transcription, DNA-dependent | transcription factor activity
Human Homolog	SS18L1[synovial sarcoma translocation gene on chromosome 18-like 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 33 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATGTTTGAA (2) ATGGTAAATG ATTCCGAATT (2) CACCACCACA 60.3 0.0603 Cb medulloblastoma CACCACCACA 9.2 0.0092 P8 GC+1d culture CACCACCACA 50.2 0.0502 P8 GC+SHH+1d culture CACCACCACA 30.4 0.0304 3T3 fibroblasts CACCACCACA 287.4 0.2874 E15 cortex CACCACCACA 34.6 0.0346 P1 cortex AATGTTTGAA (2) CACCACCACA 36.4 0.0364 Hypothalamus CACCACCACA 18.1 0.0181 E12.5 retina CACCACCACA 41.3 0.0413 E14.5 retina CACCACCACA 9.1 0.0091 E16.5 retina AATGTTTGAA (2) ATGGTAAATG CACCACCACA 21.7 0.0217 E18.5 retina CACCACCACA 23.6 0.0236 P0.5 retina CACCACCACA 41.2 0.0412 P2.5 retina CACCACCACA 24.6 0.0246 P4.5 retina ATTCCGAATT (2) CACCACCACA 27.8 0.0278 P6.5 retina ATGGTAAATG ATTCCGAATT (2) CACCACCACA 33.3 0.0333 P10.5 crx- retina CACCACCACA 13 0.013 P10.5 crx+ retina ATGGTAAATG CACCACCACA 19.2 0.0192 Adult retinal AATGTTTGAA (2) CACCACCACA 14.9 0.0149 ONL AATGTTTGAA (2) ATTCCGAATT (2) CACCACCACA 28.7 0.0287