| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GAAAGGTCAG (2) GCAAGGTCAG (3)
| 6.6 | 0.0066 |
| Cb medulloblastoma | GCAAGGTCAG (3) TACTGCTAAG (3)
| 4.6 | 0.0046 |
| P8 GC+1d culture | GAAAGGTCAG (2) GCAAGGTCAG (3) TACTGCTAAG (3)
| 12.5 | 0.0125 |
| P8 GC+SHH+1d culture | GAAAGGTCAG (2) GCAAGGTCAG (3)
| 12.9 | 0.0129 |
| 3T3 fibroblasts | GCAAGGTCAG (3)
| 7 | 0.007 |
| E15 cortex | GAAAGGTCAG (2) GCAAGGTCAG (3)
| 14.8 | 0.0148 |
| P1 cortex | GAAAGGTCAG (2)
| 13.6 | 0.0136 |
| Hypothalamus | GAAAGGTCAG (2) GCAAGGTCAG (3) GGCAAAGGCC TGTCATCACA
| 7.2 | 0.0072 |
| E12.5 retina | GCAAGGTCAG (3)
| 9.4 | 0.0094 |
| E14.5 retina | CAAGGTCAGT GCAAGGTCAG (3) TACTGCTAAG (3) TGTCATCACA
| 9 | 0.009 |
| E16.5 retina | CAAGGTCAGT GAAAGGTCAG (2) GCAAGGTCAG (3)
| 9 | 0.009 |
| E18.5 retina | GAAAGGTCAG (2) GCAAGGTCAG (3) GGCAAAGGCC TACTGCTAAG (3)
| 10.8 | 0.0108 |
| P0.5 retina | GAAAGGTCAG (2) GCAAGGTCAG (3) TGTCATCACA
| 17.7 | 0.0177 |
| P2.5 retina | GCAAGGTCAG (3) TACTGCTAAG (3) TGTCATCACA
| 10.6 | 0.0106 |
| P4.5 retina | CAAGGTCAGT
| 4 | 0.004 |
| P6.5 retina | CAAGGTCAGT GCAAGGTCAG (3) GGCAAAGGCC TACTGCTAAG (3)
| 10.1 | 0.0101 |
| P10.5 crx- retina | CAAGGTCAGT GCAAGGTCAG (3) GGCAAAGGCC
| 13 | 0.013 |
| P10.5 crx+ retina | CAAGGTCAGT GCAAGGTCAG (3)
| 9.6 | 0.0096 |
| Adult retinal | GAAAGGTCAG (2) GCAAGGTCAG (3) GGCAAAGGCC
| 11.2 | 0.0112 |
| ONL | GAAAGGTCAG (2)
| 1.9 | 0.0019 |