| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ATTGAGCCGA GAATAATAAA GGCACCGCAG
| 174.6 | 0.1746 |
| Cb medulloblastoma | AACTTCTGGG ATTGAGCCGA CTTTTAAAAA (2) GAATAATAAA GGCACCGCAG
| 173.3 | 0.1733 |
| P8 GC+1d culture | ATTGAGCCGA CTTTTAAAAA (2) GAATAATAAA GGCACCGCAG
| 155.3 | 0.1553 |
| P8 GC+SHH+1d culture | CTTTTAAAAA (2) GAATAATAAA GGCACCGCAG
| 171 | 0.171 |
| 3T3 fibroblasts | AACTTCTGGG GAATAATAAA
| 10.5 | 0.0105 |
| E15 cortex | AACTTCTGGG CTTTTAAAAA (2) GAATAATAAA GGCACCGCAG
| 24.6 | 0.0246 |
| P1 cortex | ATTTTTCTCC GAATAATAAA GGCACCGCAG
| 131.7 | 0.1317 |
| Hypothalamus | ATTTTTCTCC CTTTTAAAAA (2) GAATAATAAA
| 197.4 | 0.1974 |
| E12.5 retina | AACTTCTGGG CTTTTAAAAA (2) GAATAATAAA
| 184 | 0.184 |
| E14.5 retina | ATTTTTCTCC CTTTTAAAAA (2) GAATAATAAA
| 189.5 | 0.1895 |
| E16.5 retina | AACTTCTGGG CTTTTAAAAA (2) GAATAATAAA
| 105 | 0.105 |
| E18.5 retina | CTTTTAAAAA (2) GAATAATAAA
| 291.1 | 0.2911 |
| P0.5 retina | GAATAATAAA GGCACCGCAG
| 53 | 0.053 |
| P2.5 retina | AACTTCTGGG ATTTTTCTCC CTTTTAAAAA (2) GAATAATAAA GGCACCGCAG
| 119.7 | 0.1197 |
| P4.5 retina | AACTTCTGGG CTTTTAAAAA (2) GAATAATAAA GGCACCGCAG
| 200.1 | 0.2001 |
| P6.5 retina | CTTTTAAAAA (2) GAATAATAAA GGCACCGCAG
| 116.7 | 0.1167 |
| P10.5 crx- retina | AACTTCTGGG ATTTTTCTCC CTTTTAAAAA (2) GAATAATAAA GGCACCGCAG
| 115.3 | 0.1153 |
| P10.5 crx+ retina | CTTTTAAAAA (2) GAATAATAAA GGCACCGCAG
| 61.5 | 0.0615 |
| Adult retinal | GAATAATAAA GGCACCGCAG
| 16.7 | 0.0167 |
| ONL | ATTTTTCTCC CTTTTAAAAA (2) GAATAATAAA
| 51.7 | 0.0517 |