Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.643	Rps15	ribosomal protein S15	10		20054
Gene Ontology	cytosolic ribosome (sensu Eukarya) | intracellular | protein biosynthesis | ribosome | ribosome biogenesis | small ribosomal subunit | structural constituent of ribosome
Human Homolog	RPS15[ribosomal protein S15]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 159 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATCATCCTCC (2) CTGGGCGTGT (2) GGTGGTGCCT GTGGGCCCAT (2) GTGGGCGTGT TCCCTCAAAA TCCTATGAGC TCGAGCAGTT 102.8 0.1028 Cb medulloblastoma AGGGAAATAA (3) ATCATCCTCC (2) CTGGGCGTGT (2) GAGAAGCCTG (2) GGGTGGCCCA GGTGGTGCCT GGTGGTGGCT GTGGGCGTGT TCCCTCAAAA TCGAGCAGTT TGGGCGTGTA 87.7 0.0877 P8 GC+1d culture CCAGGCCGGG (2) CTGGGCGTGT (2) GAGAAGCCTG (2) GGTGGTGCCT GTGGGCGTGT TCCTATGAGC TCGAGCAGTT TGGGCGTGTA 116.2 0.1162 P8 GC+SHH+1d culture AGGGAAATAA (3) CTGGGCGTGT (2) GAGAAGCCTG (2) GGTGGTGCCT GTGGGCGTGT TCCCTCAAAA TCGAGCAGTT TGGGCGTGTA 118.2 0.1182 3T3 fibroblasts CTGGGCGTGT (2) GAGAAGCCTG (2) GGTGGTGCCT GTGGGCGTGA GTGGGCGTGT TCGAGCAGTT 623.9 0.6239 E15 cortex CCAGGCCGGG (2) CTGGGCGTGT (2) GGGCGGGGGG (2) GTGGGCCCAT (2) GTGGGCCGTG GTGGGCGTGT 173 0.173 P1 cortex GTGGGCCCAT (2) GTGGGCGTGT TCGAGCAGTT 59 0.059 Hypothalamus CTGGGCGTGT (2) GAGAAGCCTG (2) GGTGGTGCCT GTGGGCGTGT TCGAGCAGTT 67 0.067 E12.5 retina AGGGAAATAA (3) CTGGGCGTGT (2) GAGAAGCCTG (2) GGGCGGGGGG (2) GGTGGTGCCT GTGGGCGTGT TCCCTCAAAA TCGAGCAGTT TGGGCGTGTA 120.3 0.1203 E14.5 retina AGGGAAATAA (3) ATCATCCTGC (3) CCAGGCCGGG (2) CTGGGCGTGT (2) GGTGGTGCCT GTGGGCGTCT GTGGGCGTGT GTGGGGGTGT TCCCTCAAAA TCCCTCAGGT TCGAGCAGTT TGGGCGTGTA 87.4 0.0874 E16.5 retina ATCATCCTGC (3) CTGGGCGTGT (2) GAGAAGCCTG (2) GGTGGTGCCT GTGGGCGTGA GTGGGCGTGT TCCCTCAAAA TCCTATGAGC TCGAGCAGTT TGGGCGTGTA 117.5 0.1175 E18.5 retina AGGGAAATAA (3) GAGAAGCCTG (2) GGTGGTGCCT GTGGGCGTGT TCCCTCAAAA TCCCTCAGGT TCGAGCAGTT 78.2 0.0782 P0.5 retina AGGGAAATAA (3) ATCATCCTGC (3) CTGGGCGTGT (2) GTGGGCCGTG GTGGGCGTGT GTGGGGGTGT TCCCTCAAAA TCGAGCAGTT TGGGCGTGTA 157.2 0.1572 P2.5 retina AGGGAAATAA (3) ATGAAAATGG CCAGGCCGGG (2) CTGGGCGTGT (2) GGGCGGGGGG (2) GGTGGTGCCT GTGGGCGTGT TCCCTCAAAA TCGAGCAGTT 75.9 0.0759 P4.5 retina AGGGAAATAA (3) ATCATCCTGC (3) CTGGGCGTGT (2) GTGGGCGTGT TCCCTCAAAA TCGAGCAGTT TGGGCGTGTA 55.5 0.0555 P6.5 retina AGGGAAATAA (3) CTGGGCGTGT (2) GAGAAGCCTG (2) GGTGGTGCCT GTGGGCGTGT TCCCTCAAAA TCGAGCAGTT 73.5 0.0735 P10.5 crx- retina AGGGAAATAA (3) ATGAAAATGG CTGGGCGTGT (2) GAGAAGCCTG (2) GGGTGGCCCA GGTGGTGCCT GTGGGCGTGT GTGGGGGTGT 165.5 0.1655 P10.5 crx+ retina ATCATCCTCC (2) CTGGGCGTGT (2) GAGAAGCCTG (2) GGGTGGCCCA GTGGGCGTGT TCCCTCAAAA TCCCTCAGGT TCCTATGAGC TCGAGCAGTT 144 0.144 Adult retinal ATGAAAATGG CCAGGCCGGG (2) CTGGGCGTGT (2) GAGAAGCCTG (2) GTGGGCCGTG GTGGGCGTGA GTGGGCGTGT GTGGGGGTGT TCGAGCAGTT 96.6 0.0966 ONL AGGGAAATAA (3) CTGGGCGTGT (2) GGGTGGCCCA GGTGGTGCCT GTGGGCGTCT GTGGGCGTGT TCCCTCAGGT TCGAGCAGTT 128.2 0.1282