| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GAGTTGGCTA (3) GTTTGAGGCC (2) TTCTGCAGTC
| 4.8 | 0.0048 |
| Cb medulloblastoma | GAAGACACAG (3) GAGTTGGCTA (3) GTTTGAGGCC (2) TGCCTCTGGA
| 11.5 | 0.0115 |
| P8 GC+1d culture | GAGTTGGCTA (3) GTTTGAGGCC (2) TATATTTTGA (2) TTCTGCAGTC
| 6.8 | 0.0068 |
| P8 GC+SHH+1d culture | GAGTTGGCTA (3) GTTTGAGGCC (2) TTCTGCAGTC
| 3.6 | 0.0036 |
| E15 cortex | GCTGGCAGCA (2) TTCTGCAGTC
| 14.8 | 0.0148 |
| P1 cortex | TGTATATATG TTCTGCAGTC
| 13.6 | 0.0136 |
| Hypothalamus | GAAGACACAG (3) GTTTGAGGCC (2)
| 3.6 | 0.0036 |
| E12.5 retina | GAGTTGGCTA (3) GTTTGAGGCC (2) TTCTGCAGTC
| 7.6 | 0.0076 |
| E14.5 retina | GAGTTGGCTA (3) GCTGGCAGCA (2) GTTTGAGGCC (2) TATATTTTGA (2) TGCCTCTGGA TTCTGCAGTC
| 14.4 | 0.0144 |
| E16.5 retina | GAGTTGGCTA (3) GTTTGAGGCC (2) TGTATATATG TTCTGCAGTC
| 7.2 | 0.0072 |
| E18.5 retina | GAGTTGGCTA (3) GTTTGAGGCC (2) TGCCTCTGGA
| 12.7 | 0.0127 |
| P0.5 retina | GAGTTGGCTA (3) TTCTGCAGTC
| 5.9 | 0.0059 |
| P2.5 retina | GTTTGAGGCC (2) TGCCTCTGGA
| 3.6 | 0.0036 |
| P4.5 retina | GTTTGAGGCC (2)
| 2 | 0.002 |
| P6.5 retina | GTTTGAGGCC (2) TATATTTTGA (2) TGTACACATA
| 8.4 | 0.0084 |
| P10.5 crx- retina | GAGTTGGCTA (3) GTTTGAGGCC (2) TATATTTTGA (2) TGTATATATG TTCTGCAGTC
| 11.3 | 0.0113 |
| P10.5 crx+ retina | GAGTTGGCTA (3) GTTTGAGGCC (2) TATATTTTGA (2) TGCCTCTGGA TTCTGCAGTC
| 17.2 | 0.0172 |
| Adult retinal | GAGTTGGCTA (3) GTTTGAGGCC (2)
| 7.5 | 0.0075 |
| ONL | GAGTTGGCTA (3) GTTTGAGGCC (2) TGTACACATA
| 9.5 | 0.0095 |