Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.67938	Cstf2	cleavage stimulation factor, 3' pre-RNA subunit 2	X		108062
Gene Ontology	mRNA cleavage | mRNA polyadenylation | nucleic acid binding | nucleus | RNA binding
Human Homolog	CSTF2[cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 86 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATTTTGGGGG CAAGATATGG GACACCAGAG (2) GTTCTGGGGC 16.3 0.0163 Cb medulloblastoma ATTTTGGGGG GACACCAGAG (2) GTTTCTGAGA TAACAATGTA 60.1 0.0601 P8 GC+1d culture ATTTTGGGGG CAAGATATGG CCTGCTACCT GACACCAGAG (2) TAACAATGTA 21.8 0.0218 P8 GC+SHH+1d culture ATTTTGGGGG CAAGATATGG CCTGCTACCT GACACCAGAG (2) GTTCTGGGGC TAACAATGTA 25.9 0.0259 3T3 fibroblasts ATTTTGGGGG GACACCAGAG (2) GTTCTGGGGC 21 0.021 E15 cortex ATTTTGGGGG GACACCAGAG (2) 34.6 0.0346 P1 cortex ATTTTGGGGG CAGGTGGTGC (2) CCTGCTACCT GACACCAGAG (2) 72.7 0.0727 Hypothalamus ATTTTGGGGG CAGGTGGTGC (2) GACACCAGAG (2) GTTTCTGAGA TAACAATGTA 52.5 0.0525 E12.5 retina ATTTTGGGGG CAGGTGGTGC (2) GTTGCCTTCC TAACAATGTA 15.1 0.0151 E14.5 retina ATTTTGGGGG CAAGATATGG CAGGTGGTGC (2) GACACCAGAG (2) TAACAATGTA 41.8 0.0418 E16.5 retina ATTTTGGGGG CAAGATATGG CCTGCTACCT GACACCAGAG (2) GTTCTGGGGC GTTTCTGAGA TAACAATGTA 37.9 0.0379 E18.5 retina GACACCAGAG (2) TAACAATGTA 18.2 0.0182 P0.5 retina ATTTTGGGGG CAAGATATGG CCTGCTACCT GACACCAGAG (2) TAACAATGTA 21.6 0.0216 P2.5 retina ATTTTGGGGG CAAGATATGG GACACCAGAG (2) GTTGCCTTCC TAACAATGTA 26.4 0.0264 P4.5 retina ATTTTGGGGG GACACCAGAG (2) GTTCTGGGGC 27.7 0.0277 P6.5 retina ATTTTGGGGG CAAGATATGG CAGGTGGTGC (2) CCTGCTACCT GACACCAGAG (2) TAACAATGTA 30.1 0.0301 P10.5 crx- retina ATTTTGGGGG GACACCAGAG (2) 33.5 0.0335 P10.5 crx+ retina ATTTTGGGGG CAAGATATGG GACACCAGAG (2) GTTTCTGAGA TAACAATGTA 34.5 0.0345 Adult retinal ATTTTGGGGG CAAGATATGG CAGGTGGTGC (2) CCTGCTACCT GACACCAGAG (2) GTTGCCTTCC 39 0.039 ONL ATTTTGGGGG CCTGCTACCT TAACAATGTA 11.5 0.0115