| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GCGCCGCAGA (2) TATGTGAGTA (3) TGGAGCGTTG (3)
| 9.8 | 0.0098 |
| Cb medulloblastoma | GCGCCGCAGA (2) TGGACGGTGG
| 23.1 | 0.0231 |
| P8 GC+1d culture | GCGCCGCAGA (2) TGGAGCGTTG (3)
| 19.4 | 0.0194 |
| P8 GC+SHH+1d culture | GCGCCGCAGA (2) TATGTGAGTA (3) TGGAGCGTTG (3)
| 31.7 | 0.0317 |
| 3T3 fibroblasts | GCGCCGCAGA (2) TGGAGCGTTG (3)
| 164.7 | 0.1647 |
| E15 cortex | GCGCCGCAGA (2) TGGACGGTGG TGGAGCGTTG (3)
| 64.2 | 0.0642 |
| P1 cortex | TGGACGGTGG TGGAGCGTTG (3)
| 18.1 | 0.0181 |
| Hypothalamus | TGGACGGTGG TGGAGCGTTG (3)
| 12.7 | 0.0127 |
| E12.5 retina | CAAACTGCAT (2) GCGCCGCAGA (2) TGGAGCGTTG (3)
| 18.9 | 0.0189 |
| E14.5 retina | TATGTGAGTA (3) TGGAGCGTTG (3) TGGGTTGCTG
| 7.2 | 0.0072 |
| E16.5 retina | CAAACTGCAT (2) GTGGTCACAA TATGTGAGTA (3) TGGACGGTGG TGGAGCGTTG (3)
| 9 | 0.009 |
| E18.5 retina | GCGCCGCAGA (2) TGGAGCGTTG (3)
| 5.4 | 0.0054 |
| P0.5 retina | GCGCCGCAGA (2) GTGGTCACAA TGGACGGTGG TGGAGCGTTG (3)
| 39.3 | 0.0393 |
| P2.5 retina | TATGTGAGTA (3) TGGACGGTGG TGGAGCGTTG (3)
| 10.6 | 0.0106 |
| P4.5 retina | TGGACGGTGG TGGAGCGTTG (3)
| 8 | 0.008 |
| P6.5 retina | TATGTGAGTA (3) TGGACGGTGG TGGAGCGTTG (3)
| 13.3 | 0.0133 |
| P10.5 crx- retina | GTGGTCACAA TGGACGGTGG TGGAGCGTTG (3) TGGGTTGCTG
| 13.1 | 0.0131 |
| P10.5 crx+ retina | GCGCCGCAGA (2) TGGACGGTGG TGGAGCGTTG (3)
| 9.6 | 0.0096 |
| Adult retinal | GTGGTCACAA TATGTGAGTA (3) TGGACGGTGG TGGAGCGTTG (3)
| 18.6 | 0.0186 |
| ONL | TATGTGAGTA (3) TGGGTTGCTG
| 5.7 | 0.0057 |