| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CTTCCTGCCG
| 4.9 | 0.0049 |
| Cb medulloblastoma | GTCCTGGCCA TGGGGTCTGT
| 9.2 | 0.0092 |
| P8 GC+1d culture | CTTCCTGCCG TGGGGTCTGT TTAGTGTTCT
| 18.2 | 0.0182 |
| P8 GC+SHH+1d culture | CTTCCTGCCG TGGGGTCTGT
| 11.7 | 0.0117 |
| 3T3 fibroblasts | CCCAGTGGCT GTCCTGGCCA
| 14 | 0.014 |
| E15 cortex | CTTCCTGCCG TGGGGTCTGT
| 9.8 | 0.0098 |
| P1 cortex | TGGGGTCTGT
| 4.5 | 0.0045 |
| Hypothalamus | CTTCCTGCCG GTGCTGGACG (3) TGGGGTCTGT
| 14.4 | 0.0144 |
| E12.5 retina | CTTCCTGCCG GTCCTGGCCA
| 13.1 | 0.0131 |
| E14.5 retina | CTTCCTGCCG GTCCTGGCCA GTGCTGGACG (3) TGGGGTCTGT
| 16.4 | 0.0164 |
| E16.5 retina | CTTCCTGCCG GTCCTGGCCA GTGCTGGACG (3)
| 28.9 | 0.0289 |
| E18.5 retina | CTTCCTGCCG GTGCTGGACG (3) TGGGGTCTGT
| 14.6 | 0.0146 |
| P0.5 retina | CTTCCTGCCG GTCCTGGCCA TGGGGTCTGT
| 19.7 | 0.0197 |
| P2.5 retina | CTTCCTGCCG GTGCTGGACG (3)
| 12.4 | 0.0124 |
| P4.5 retina | CTTCCTGCCG GTCCTGGCCA TGGGGTCTGT
| 13.8 | 0.0138 |
| P6.5 retina | CTTCCTGCCG TGGGGTCTGT
| 15 | 0.015 |
| P10.5 crx- retina | CCCAGTGGCT CTTCCTGCCG GTCCTGGCCA TGGGGTCTGT
| 13.1 | 0.0131 |
| P10.5 crx+ retina | TGGGGTCTGT TTAGTGTTCT
| 11.5 | 0.0115 |
| Adult retinal | CTTCCTGCCG TGGGGTCTGT
| 16.7 | 0.0167 |
| ONL | CTTCCTGCCG TTAGTGTTCT
| 5.7 | 0.0057 |