| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GAGGAGAAGA GATTTCCCAG
| 71.8 | 0.0718 |
| Cb medulloblastoma | GAGGAGAAGA GATTTCCCAG
| 62.5 | 0.0625 |
| P8 GC+1d culture | GACTTCTGCC (2) GAGGAGAAGA GATTTCCCAG
| 66.2 | 0.0662 |
| P8 GC+SHH+1d culture | GAGGAGAAGA GATTTCCCAG GGTTTCCCAG
| 90.2 | 0.0902 |
| 3T3 fibroblasts | GAGGAGAAGA GATTTCCCAG
| 21 | 0.021 |
| E15 cortex | GAGGAGAAGA
| 14.8 | 0.0148 |
| P1 cortex | GAGGAGAAGA GATTTCCCAG
| 18.2 | 0.0182 |
| Hypothalamus | CTGCTGGCCA (2) GAGGAGAAGA GATTTCCCAG
| 86.9 | 0.0869 |
| E12.5 retina | GACTTCTGCC (2) GAGGAGAAGA GATTTCCCAG GGGGAAGCAA (2)
| 270.4 | 0.2704 |
| E14.5 retina | CTGCGAGTCT GAGGAGAAGA GATTTCCCAG
| 102 | 0.102 |
| E16.5 retina | CTGCGAGTCT GACTTCTGCC (2) GAGGAGAAGA GATTTCCCAG
| 85.1 | 0.0851 |
| E18.5 retina | GAGGAGAAGA GATTTCCCAG
| 91 | 0.091 |
| P0.5 retina | CTGCGAGTCT GAGGAGAAGA GATTTCCCAG GGTTTCCCAG
| 96.3 | 0.0963 |
| P2.5 retina | GAGGAGAAGA GATTTCCCAG
| 86.3 | 0.0863 |
| P4.5 retina | GAGGAGAAGA GATTTCCCAG
| 99 | 0.099 |
| P6.5 retina | GAGGAGAAGA GATTTCCCAG GGTTTCCCAG
| 58.4 | 0.0584 |
| P10.5 crx- retina | GAGGAGAAGA GATTTCCCAG
| 37.2 | 0.0372 |
| P10.5 crx+ retina | CTGCTGGCCA (2) GAGGAGAAGA GATTTCCCAG
| 65.3 | 0.0653 |
| Adult retinal | CTGCTGGCCA (2) GAGGAGAAGA GATTTCCCAG
| 46.3 | 0.0463 |
| ONL | GAGGAGAAGA GATTTCCCAG
| 40.2 | 0.0402 |