Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.7142	Mbd3	methyl-CpG binding domain protein 3	10	10 43.0 cM	17192
Gene Ontology	chromatin | DNA binding | DNA methylation | nucleus | regulation of transcription, DNA-dependent
Human Homolog	MBD3[methyl-CpG binding domain protein 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 58 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACCAACCGTC (2) GTGACAGATG (2) TGAGGAGCTG (2) TGCAGGAGCT TGGAGGAGCT 21.2 0.0212 Cb medulloblastoma ACCAACCGTC (2) 2.3 0.0023 P8 GC+1d culture GTGACAGATG (2) TGAGGAGCTG (2) TGCAGGAGCT TGGAGGAGCT 28.5 0.0285 P8 GC+SHH+1d culture GACTTGCCCA TGCAGGAGCT TGGAGGAGCT 28.2 0.0282 3T3 fibroblasts TGCAGGAGCT 17.5 0.0175 E15 cortex GACCTCAGCA (2) TGCAGGAGCT TGGAGGAGCT 24.7 0.0247 P1 cortex TGCAGGAGCT 9.1 0.0091 Hypothalamus GACCTCAGCA (2) GTGACAGATG (2) TGAGGAGCTG (2) TGCAGGAGCT TGGAGGAGCT 12.6 0.0126 E12.5 retina TGCAGGAGCT 9.4 0.0094 E14.5 retina GACTTGCCCA TGCAGGAGCT 7.3 0.0073 E16.5 retina TGCAGGAGCT TGGAGGAGCT TGGGGAGCTT 19.9 0.0199 E18.5 retina TGAGGAGCTG (2) TGCAGGAGCT TGGAGGAGCT 7.2 0.0072 P0.5 retina ACCAACCGTC (2) TGCAGGAGCT TGGAGGAGCT TGGGGAGCTT 33.4 0.0334 P2.5 retina GTGACAGATG (2) TGAGGAGCTG (2) TGCAGGAGCT TGGAGGAGCT 14.1 0.0141 P4.5 retina GACTTGCCCA TGCAGGAGCT TGGAGGAGCT 11.9 0.0119 P6.5 retina GTGACAGATG (2) TGCAGGAGCT TGGAGGAGCT 16.7 0.0167 P10.5 crx- retina ACCAACCGTC (2) TGAGGAGCTG (2) TGCAGGAGCT TGGAGGAGCT 22.4 0.0224 P10.5 crx+ retina TGAGGAGCTG (2) TGCAGGAGCT TGGAGGAGCT 9.6 0.0096 Adult retinal TGAGGAGCTG (2) TGCAGGAGCT TGGAGGAGCT 20.4 0.0204 ONL GTGACAGATG (2) TGCAGGAGCT 5.7 0.0057