Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]
Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24

 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.716 Cpsf2cleavage and polyadenylation specific factor 2 12    51786 
 Gene Ontology mRNA processing | nucleus | RNA binding
 Human Homolog CPSF2[cleavage and polyadenylation specific factor 2, 100kDa]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 133 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCAGAGCAGAGA (5)
AGATCCAACT
ATTCTTTATA (3)
CACTGGTTCC (5)
TCAAAAAAAA (2)
TGCAAGGCCC (2)
TGTGAAGCCC (2)
TGTGAGGCCC
TTTTTTTTTT (2)
40.60.0406
Cb medulloblastomaAGATCCAACT
ATTCTTTATA (3)
TAGCAAAAAA
TCAAAAAAAA (2)
TCCACCAGAT (2)
TGCAAGGCCC (2)
TTTTTTTTTT (2)
129.40.1294
P8 GC+1d cultureAGAGCAGAGA (5)
ATTCTTTATA (3)
GTTAGAGCCT
TAGCAAAAAA
TCAAAAAAAA (2)
TGCAAGGCCC (2)
TGTGAAGCCC (2)
TGTGAGGCCC
TTTTTTTTTT (2)
62.70.0627
P8 GC+SHH+1d cultureAGAGCAGAGA (5)
ATTCTTTATA (3)
TAGCAAAAAA
TCAAAAAAAA (2)
TGCAAGGCCC (2)
TGTGAGGCCC
TTTTTTTTTT (2)
75.10.0751
3T3 fibroblastsAGAGCAGAGA (5)
TCAAAAAAAA (2)
TGCAAGGCCC (2)
TGTGAAGCCC (2)
45.50.0455
E15 cortexAGATCCAACT
GTTAGAGCCT
TCAAAAAAAA (2)
TCCACCAGAT (2)
TGCAAGGCCC (2)
TGTGAGGCCC
TTTTTTTTTT (2)
49.20.0492
P1 cortexAGAGCAGAGA (5)
AGATCCAACT
ATTCTTTATA (3)
TCAAAAAAAA (2)
TGCAAGGCCC (2)
TGTGAAGCCC (2)
TTTTTTTTTT (2)
63.40.0634
HypothalamusAGAGCAGAGA (5)
AGATCCAACT
TCAAAAAAAA (2)
TGCAAGGCCC (2)
TGTGAGGCCC
TTTTTTTTTT (2)
65.10.0651
E12.5 retinaATTCTTTATA (3)
TCAAAAAAAA (2)
TGCAAGGCCC (2)
TTTTTTTTTT (2)
33.80.0338
E14.5 retinaAGATCCAACT
ATTCTTTATA (3)
CACTGGTTCC (5)
GTTAGAGCCT
TAGCAAAAAA
TCAAAAAAAA (2)
TGCAAGGCCC (2)
TGTGAAGCCC (2)
TTTTTTTTTT (2)
1020.102
E16.5 retinaATTCTTTATA (3)
TCAAAAAAAA (2)
TGCAAGGCCC (2)
TGTGAAGCCC (2)
TGTGAGGCCC
TTTTTTTTTT (2)
470.047
E18.5 retinaATTCTTTATA (3)
TAGCAAAAAA
TCAAAAAAAA (2)
TGCAAGGCCC (2)
TGTGAGGCCC
TTTTTTTTTT (2)
74.50.0745
P0.5 retinaAGAGCAGAGA (5)
AGATCCAACT
ATTCTTTATA (3)
TCAAAAAAAA (2)
TCCACCAGAT (2)
TGCAAGGCCC (2)
TGTGAAGCCC (2)
TGTGAGGCCC
TTTTTTTTTT (2)
66.80.0668
P2.5 retinaAGAGCAGAGA (5)
ATTCTTTATA (3)
TAGCAAAAAA
TCAAAAAAAA (2)
TCCACCAGAT (2)
TGCAAGGCCC (2)
TGTGAAGCCC (2)
TGTGAGGCCC
TTTTTTTTTT (2)
68.60.0686
P4.5 retinaAGAGCAGAGA (5)
ATTCTTTATA (3)
TCAAAAAAAA (2)
TGCAAGGCCC (2)
TGTGAAGCCC (2)
TGTGAGGCCC
TTTTTTTTTT (2)
63.40.0634
P6.5 retinaTCAAAAAAAA (2)
TGCAAGGCCC (2)
TGTGAAGCCC (2)
TTTTTTTTTT (2)
53.30.0533
P10.5 crx- retinaAGATCCAACT
ATTCTTTATA (3)
CACTGGTTCC (5)
TAGCAAAAAA
TCAAAAAAAA (2)
TGCAAGGCCC (2)
35.40.0354
P10.5 crx+ retinaAGAGCAGAGA (5)
AGATCCAACT
TCAAAAAAAA (2)
TGCAAGGCCC (2)
TTTTTTTTTT (2)
30.70.0307
Adult retinalAGAGCAGAGA (5)
AGATCCAACT
ATTCTTTATA (3)
TAGCAAAAAA
TCAAAAAAAA (2)
TCCACCAGAT (2)
TGCAAGGCCC (2)
TTTTTTTTTT (2)
53.90.0539
ONLATTCTTTATA (3)
TCAAAAAAAA (2)
TGCAAGGCCC (2)
TTTTTTTTTT (2)
24.80.0248