| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAGCAAAGC TCTAACTCTG (2) TGAAAAAAAA (2)
| 35.9 | 0.0359 |
| Cb medulloblastoma | AAAGCAAAGC CATTTTCTTT CTTTTATGGA (2) TCTAACTCTG (2) TGAAAAAAAA (2)
| 97.1 | 0.0971 |
| P8 GC+1d culture | AAAGCAAAGC CATTTTCTTT CTTTTATGGA (2) TCTAACTCTG (2) TGAAAAAAAA (2)
| 37.7 | 0.0377 |
| P8 GC+SHH+1d culture | AAAGCAAAGC GGTTCTCTTT (2) TCTAACTCTG (2) TGAAAAAAAA (2)
| 73.8 | 0.0738 |
| 3T3 fibroblasts | TGAAAAAAAA (2)
| 7 | 0.007 |
| E15 cortex | TGAAAAAAAA (2)
| 29.7 | 0.0297 |
| P1 cortex | AAAGCAAAGC CTTTTATGGA (2) GGTTCTCTTT (2) TGAAAAAAAA (2)
| 22.6 | 0.0226 |
| Hypothalamus | AAAGCAAAGC CTTTTATGGA (2) TGAAAAAAAA (2)
| 76 | 0.076 |
| E12.5 retina | AAAGCAAAGC CTTTTATGGA (2) TGAAAAAAAA (2)
| 37.6 | 0.0376 |
| E14.5 retina | AAAGCAAAGC CATTTTCTTT TCTAACTCTG (2) TGAAAAAAAA (2)
| 71 | 0.071 |
| E16.5 retina | AAAGCAAAGC TCTAACTCTG (2) TGAAAAAAAA (2)
| 30.8 | 0.0308 |
| E18.5 retina | AAAGCAAAGC TCTAACTCTG (2) TGAAAAAAAA (2)
| 92.8 | 0.0928 |
| P0.5 retina | AAAGCAAAGC TGAAAAAAAA (2)
| 23.6 | 0.0236 |
| P2.5 retina | AAAGCAAAGC TCTAACTCTG (2) TGAAAAAAAA (2)
| 56.3 | 0.0563 |
| P4.5 retina | AAAGCAAAGC TCTAACTCTG (2) TGAAAAAAAA (2)
| 61.5 | 0.0615 |
| P6.5 retina | AAAGCAAAGC CATTTTCTTT CTTTTATGGA (2) TGAAAAAAAA (2)
| 61.7 | 0.0617 |
| P10.5 crx- retina | AAAGCAAAGC CTTTTATGGA (2) TCTAACTCTG (2) TGAAAAAAAA (2)
| 40.9 | 0.0409 |
| P10.5 crx+ retina | AAAGCAAAGC GGTTCTCTTT (2) TCTAACTCTG (2) TGAAAAAAAA (2)
| 69.2 | 0.0692 |
| Adult retinal | AAAGCAAAGC CTTTTATGGA (2) GGTTCTCTTT (2) TGAAAAAAAA (2)
| 22.4 | 0.0224 |
| ONL | AAAGCAAAGC TCTAACTCTG (2) TGAAAAAAAA (2)
| 28.8 | 0.0288 |