Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]
Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24

 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.7281 AI413331expressed sequence AI413331 2    98940 
 Mm.7281 Col5a1procollagen, type V, alpha 1 2  2 18.0 cM  12831 
 Gene Ontology cell adhesion | collagen | collagen type V | extracellular matrix | extracellular matrix structural constituent | extracellular matrix structural constituent conferring tensile strength | extracellular space | heparin binding | structural molecule activity
 Human Homolog COL5A1[collagen, type V, alpha 1]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 39 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCACCTAGCCAC (2)
CAAGACTGAA (5)
TCCAGGCTGA
130.013
Cb medulloblastomaGACGTACACA (3)
TTTTTTAAAA (3)
4.60.0046
P8 GC+1d cultureACCTAGCCAC (2)
CAAGACTGAA (5)
GAAGAGATCT (5)
4.50.0045
P8 GC+SHH+1d cultureACCTAGCCAC (2)
GGTCCTCCAG (2)
TTTTTTAAAA (3)
70.007
E15 cortexTCCAGGCTGA
4.90.0049
HypothalamusCAAGACTGAA (5)
GACGTACACA (3)
3.60.0036
E12.5 retinaCAAGACTGAA (5)
GACGTACACA (3)
9.40.0094
E14.5 retinaCCTGCCTGAC
GAAGAGATCT (5)
5.40.0054
E16.5 retinaGAAGAGATCT (5)
3.60.0036
E18.5 retinaGAAGAGATCT (5)
TTTTTTAAAA (3)
110.011
P0.5 retinaCAAGACTGAA (5)
GAAGAGATCT (5)
GGTCCTCCAG (2)
60.006
P2.5 retinaCAAGACTGAA (5)
GAAGAGATCT (5)
TTTTTTAAAA (3)
7.10.0071
P4.5 retinaCAAGACTGAA (5)
CCTGCCTGAC
GAAGAGATCT (5)
100.01
P6.5 retinaACCTAGCCAC (2)
CCTGCCTGAC
3.40.0034
P10.5 crx- retinaACCTAGCCAC (2)
CAAGACTGAA (5)
5.60.0056
P10.5 crx+ retinaACCTAGCCAC (2)
CAAGACTGAA (5)
7.70.0077
Adult retinalACCTAGCCAC (2)
CCTGCCTGAC
TCCAGGCTGA
5.70.0057