Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.7286	Ctbp1	C-terminal binding protein 1	5		13016
Gene Ontology	Golgi apparatus | L-serine biosynthesis | nucleus | oxidoreductase activity | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | protein binding
Human Homolog	CTBP1[C-terminal binding protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 115 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATGAAAAGG AGCAGGACGG CCAAAATTAG TCTGTGTCCT (3) TTTGTGACTG 83.2 0.0832 Cb medulloblastoma ACCTGCTGTG (2) AGACAAGGAG AGCAGGACGG CAGTCTGCCA (3) GGGGGGGGGG TCTGTGTCCT (3) TTTGTGACTG 43.8 0.0438 P8 GC+1d culture AGCAGGACGG CAGTCTGCCA (3) CCAAAATTAG GCCTGCCCCC GGGGGGGGGG TCTGTGTCCT (3) TTTGTGACTG 62.7 0.0627 P8 GC+SHH+1d culture AGCAGGACGG CAGTCTGCCA (3) GCCTGCCCCC GGGGGGGGGG TCTGTGTCCT (3) TTTGTGACTG TTTGTGTCTG (2) 72.6 0.0726 3T3 fibroblasts ACCTGCTGTG (2) GCCTGCCCCC GGGGGGGGGG TTTGTGACTG 21 0.021 E15 cortex GGGGGGGGGG TCTGTGTCCT (3) TGGTAGGCTA TTTGTGACTG TTTGTGTCTG (2) 49.3 0.0493 P1 cortex TCTGTGTCCT (3) TTTGTGACTG 13.6 0.0136 Hypothalamus ACCTGCTGTG (2) AGCAGGACGG CAGTCTGCCA (3) CCAAAATTAG GGGGGGGGGG TCTGTGTCCT (3) TGGTAGGCTA TTTGTGACTG 47 0.047 E12.5 retina AATGAAAAGG CCAAAATTAG TCTGTGTCCT (3) TGGTAGGCTA TTTGTGACTG 58.2 0.0582 E14.5 retina AGCAGGACGG CAGTCTGCCA (3) CCAAAATTAG GCCTGCCCCC TCTGTGTCCT (3) TTTGTGACTG 83.7 0.0837 E16.5 retina AGCAGGACGG ATCAACCACT (4) TCTGTGTCCT (3) TGGTAGGCTA TTTGTGACTG 94.2 0.0942 E18.5 retina AGCAGGACGG CCAAAATTAG TCTGTGTCCT (3) TTTGTGACTG TTTGTGTCTG (2) 56.3 0.0563 P0.5 retina AGCAGGACGG ATCAACCACT (4) CAGTCTGCCA (3) CCAAAATTAG GCCTGCCCCC TCTGTGTCCT (3) TGGTAGGCTA TTTGTGACTG TTTGTGTCTG (2) 65 0.065 P2.5 retina AATGAAAAGG GCCTGCCCCC GGGGGGGGGG TCTGTGTCCT (3) TTTGTGACTG 77.4 0.0774 P4.5 retina GGGGGGGGGG TCTGTGTCCT (3) TTTGTGACTG TTTGTGTCTG (2) 45.5 0.0455 P6.5 retina AATGAAAAGG ACCTGCTGTG (2) CAGTCTGCCA (3) GGGGGGGGGG TCTGTGTCCT (3) TGGTAGGCTA TTTGTGACTG 58.4 0.0584 P10.5 crx- retina AGACAAGGAG CAGTCTGCCA (3) CCAAAATTAG TCTGTGTCCT (3) TGGTAGGCTA TTTGTGACTG TTTGTGTCTG (2) 76.2 0.0762 P10.5 crx+ retina ACCTGCTGTG (2) AGACAAGGAG AGCAGGACGG ATCAACCACT (4) CAGTCTGCCA (3) CCAAAATTAG GGGGGGGGGG TCTGTGTCCT (3) TTTGTGACTG 59.4 0.0594 Adult retinal ACCTGCTGTG (2) AGCAGGACGG CCAAAATTAG GGGGGGGGGG TCTGTGTCCT (3) TTTGTGACTG 28 0.028 ONL GGGGGGGGGG TTTGTGACTG 23 0.023