Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.7420	Tubb4	tubulin, beta 4	17	17 34.5 cM	22153
Gene Ontology	cilium | GTP binding | GTPase activity | microtubule | microtubule polymerization | microtubule-based movement | microtubule-based process | structural constituent of cytoskeleton | structural molecule activity | tubulin
Human Homolog	TUBB5[tubulin, beta, 5]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 70 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATGGAGTCA AGTGGAGTCA (2) CCCAGATATT CTCTGTTTTT (4) GACGAGATGG TACACACACA (2) 16.3 0.0163 Cb medulloblastoma AATGGAGTCA AGGGCCAAGC CCCAGATATT GACGAGATGG TACACACACA (2) TACACACGCA (4) 18.4 0.0184 P8 GC+1d culture CCCAGATATT CTCTGTTTTT (4) 5.7 0.0057 P8 GC+SHH+1d culture CCCAGATATT TACACACGCA (4) 5.9 0.0059 3T3 fibroblasts TACACACGCA (4) 3.5 0.0035 E15 cortex CTCTGTTTTT (4) GACGAGATGG 14.8 0.0148 P1 cortex CCCAGATATT TACACACGCA (4) 13.6 0.0136 Hypothalamus AGGGCCAAGC CTCTGTTTTT (4) TACACACACA (2) TACACACGCA (4) 19.8 0.0198 E12.5 retina AGGGCCAAGC CCCAGATATT CTCTGTTTTT (4) TACACACACA (2) 7.6 0.0076 E14.5 retina AATGGAGTCA GACGAGATGG TACACACACA (2) TACACACGCA (4) 18.2 0.0182 E16.5 retina AATGGAGTCA CCCAGATATT GACGAGATGG TACACACACA (2) TACACACGCA (4) 30.7 0.0307 E18.5 retina AATGGAGTCA CCCAGATATT GACGAGATGG TACACACACA (2) 12.7 0.0127 P0.5 retina AATGGAGTCA CCCAGATATT GCCAGGATTC (2) TACACACACA (2) TACACACGCA (4) 13.9 0.0139 P2.5 retina CCCAGATATT CTCTGTTTTT (4) 3.6 0.0036 P4.5 retina AATGGAGTCA CTCTGTTTTT (4) GCCAGGATTC (2) TACACACACA (2) 10 0.01 P6.5 retina CCCAGATATT CTCTGTTTTT (4) GACGAGATGG TACACACACA (2) TACACACGCA (4) 11.7 0.0117 P10.5 crx- retina CCCAGATATT CTCTGTTTTT (4) GCCAGGATTC (2) TACACACACA (2) TACACACGCA (4) 16.8 0.0168 P10.5 crx+ retina AGGGCCAAGC TACACACACA (2) TACACACGCA (4) 7.6 0.0076 Adult retinal CCCAGATATT TACACACACA (2) 13 0.013 ONL TACACACACA (2) TACACACGCA (4) 15.3 0.0153