Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.74208	Pphln1	periphilin 1	15		223828
Gene Ontology	nucleus
Human Homolog	PPHLN1[periphilin 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 46 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GACCAAAATA GGTATAAAAA (2) TTTGTAAGTT 6.5 0.0065 Cb medulloblastoma TTTTTTGTTT (3) 2.3 0.0023 P8 GC+1d culture AATTTTAGAT GACCAAAAAT (3) TTTGTAAGTT TTTTTTGTTT (3) 10.2 0.0102 P8 GC+SHH+1d culture GGCTCTGGGG TTTGTAAGTT TTTTTTGTTT (3) 4.7 0.0047 E15 cortex TTTTTTGTTT (3) 4.9 0.0049 P1 cortex TTTGTAAGTT TTTTTTGTTT (3) 9 0.009 Hypothalamus AATTTTAGAT GACCAAAAAT (3) 3.6 0.0036 E12.5 retina GACCAAAAAT (3) TCGTCAATTA TTTTTTGTTT (3) 9.5 0.0095 E14.5 retina GACCAAAAAT (3) GACCAAAATA TTTGTAAGTT 7.2 0.0072 E16.5 retina GACCAAAAAT (3) TTTGTAAGTT TTTTTTGTTT (3) 7.2 0.0072 E18.5 retina GACCAAAAAT (3) 1.8 0.0018 P0.5 retina GACCAAAAAT (3) 7.9 0.0079 P2.5 retina GACCAAAAAT (3) TTTGTAAGTT 17.6 0.0176 P4.5 retina GACCAAAAAT (3) TTTGTAAGTT TTTTTTGTTT (3) 9.9 0.0099 P6.5 retina GGCTCTGGGG GGTATAAAAA (2) TTTGTAAGTT 6.7 0.0067 P10.5 crx- retina GACCAAAAAT (3) TTTGTAAGTT 5.6 0.0056 P10.5 crx+ retina GACCAAAAAT (3) TTTGTAAGTT TTTTTTGTTT (3) 5.7 0.0057 Adult retinal GACCAAAATA GGCTCTGGGG GGTATAAAAA (2) 5.7 0.0057 ONL GACCAAAAAT (3) TCGTCAATTA TTTGTAAGTT 5.7 0.0057