Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.7524	Dag1	dystroglycan 1	9	9 60.0 cM	13138
Gene Ontology	cytoskeleton | dystroglycan complex | insoluble fraction | integral to membrane | morphogenesis of an epithelial sheet | plasma membrane | protein binding
Human Homolog	DAG1[dystroglycan 1 (dystrophin-associated glycoprotein 1)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 58 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGGCCAGGA (3) GAAAACAGTA (2) TAGAGAGGAG 4.8 0.0048 Cb medulloblastoma CTGGCCAGGA (3) GCAGAACCGG 4.6 0.0046 P8 GC+1d culture CTGGCCAGGA (3) GAAAACAGTA (2) GCAATGCCCA TAGAGAGGAG TGATGCTCTT TTACATCCTG 19.2 0.0192 P8 GC+SHH+1d culture CTGGCCAGGA (3) TAGAGAGGAG 4.6 0.0046 3T3 fibroblasts GCAATGCCCA GCAGAACCGG TAGAGAGGAG TGATGCTCTT 17.5 0.0175 E15 cortex CTGGCCAGGA (3) GAAGGGCAAG TAGAGAGGAG 14.7 0.0147 P1 cortex TAGAGAGGAG TGATGCTCTT TTACATCCTG 31.8 0.0318 Hypothalamus TAGAGAGGAG 1.8 0.0018 E12.5 retina CTGGCCAGGA (3) GCAATGCCCA TAGAGAGGAG 13.2 0.0132 E14.5 retina CTGGCCAGGA (3) 1.8 0.0018 E16.5 retina CTGGCCAGGA (3) GCAATGCCCA 7.2 0.0072 E18.5 retina CTGGCCAGGA (3) GAAAACAGCA TAGAGAGGAG 16.4 0.0164 P0.5 retina GAAGGGCAAG GCAGAACCGG TAGAGAGGAG TGATGCTCTT TTACATCCTG 17.8 0.0178 P2.5 retina CTGGCCAGGA (3) TAGAGAGGAG 8.8 0.0088 P4.5 retina CTGGCCAGGA (3) GAAAACAGCA TAGAGAGGAG TGGGAAAACA (2) 8 0.008 P6.5 retina CTGGCCAGGA (3) TAGAGAGGAG TGGGAAAACA (2) 8.3 0.0083 P10.5 crx- retina CTGGCCAGGA (3) TAGAGAGGAG 7.4 0.0074 P10.5 crx+ retina CTGGCCAGGA (3) GCAGAACCGG TAGAGAGGAG TGGGAAAACA (2) 11.5 0.0115 Adult retinal CTGGCCAGGA (3) GAAGGGCAAG 3.8 0.0038 ONL CTGGCCAGGA (3) TAGAGAGGAG TGGGAAAACA (2) 5.7 0.0057