Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.80484	Usp40	ubiquitin specific protease 40	1		227334
Gene Ontology	cysteine-type endopeptidase activity | cysteine-type peptidase activity | hydrolase activity | ubiquitin thiolesterase activity | ubiquitin-dependent protein catabolism
Human Homolog	USP40[ubiquitin specific protease 40]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 82 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CACACAGTGG (2) CCTGTAATCC (2) TGGTTGCTGG TGGTTTCTGG (2) 78.2 0.0782 Cb medulloblastoma CCTGTAATCC (2) TGGTTGCTGG TTGGGGAACC (2) 143.4 0.1434 P8 GC+1d culture CACACAGTGG (2) CCTGTAATCC (2) TCTGCTGAAG TGGTTGCTGG TGGTTTCTGG (2) TTGGGGAACC (2) 67.3 0.0673 P8 GC+SHH+1d culture CACACAGTGG (2) CCTGTAATCC (2) TCTGCTGAAG TGGTTGCTGG TGGTTTCTGG (2) TTGGGGAACC (2) 104.2 0.1042 3T3 fibroblasts CACACAGTGG (2) CCTGTAATCC (2) TCTGCTGAAG TGGTTGCTGG TGGTTTCTGG (2) TTGGGGAACC (2) 252.3 0.2523 E15 cortex CCTGTAATCC (2) TGGTTGCTGG 282 0.282 P1 cortex CACACAGTGG (2) CCTGTAATCC (2) TGGTTGCTGG TGGTTTCTGG (2) 109 0.109 Hypothalamus CCTGTAATCC (2) TGGTTGCTGG TGGTTTCTGG (2) TTGGGGAACC (2) 369.5 0.3695 E12.5 retina CACACAGTGG (2) CCTGTAATCC (2) TGGTTGCTGG TGGTTTCTGG (2) TTGGGGAACC (2) 172.8 0.1728 E14.5 retina CCTGTAATCC (2) TGGTTGCTGG TGGTTTCTGG (2) 951.1 0.9511 E16.5 retina CCTGTAATCC (2) TGGTTGCTGG TGGTTTCTGG (2) 789.6 0.7896 E18.5 retina CCTGTAATCC (2) TGGTTGCTGG TGGTTTCTGG (2) 256.4 0.2564 P0.5 retina CCTGTAATCC (2) TCTGCTGAAG TGGTTGCTGG TGGTTTCTGG (2) TTGGGGAACC (2) 206 0.206 P2.5 retina CACACAGTGG (2) CCTGTAATCC (2) TGGTTGCTGG TGGTTTCTGG (2) 177.7 0.1777 P4.5 retina CCTGTAATCC (2) TGGTTGCTGG TGGTTTCTGG (2) TTGGGGAACC (2) 168.4 0.1684 P6.5 retina CCTGTAATCC (2) TCTGCTGAAG TGGTTGCTGG TTGGGGAACC (2) 163.4 0.1634 P10.5 crx- retina CCTGTAATCC (2) TCTGCTGAAG TGGTTGCTGG TGGTTTCTGG (2) TTGGGGAACC (2) 306.5 0.3065 P10.5 crx+ retina CCTGTAATCC (2) TGGTTGCTGG TGGTTTCTGG (2) TTGGGGAACC (2) 128.7 0.1287 Adult retinal CCTGTAATCC (2) TGGTTGCTGG TTGGGGAACC (2) 244.4 0.2444 ONL CCTGTAATCC (2) TGGTTGCTGG TGGTTTCTGG (2) TTGGGGAACC (2) 415.6 0.4156