Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.81144	Capn12	calpain 12	7		60594
Gene Ontology	calcium ion binding | calpain activity | cysteine-type endopeptidase activity | cysteine-type peptidase activity | hydrolase activity | intracellular | proteolysis and peptidolysis
Human Homolog	CAPN12[calpain 12]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 40 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAATATTTTT 1.6 0.0016 Cb medulloblastoma TAATATTTTT TGCCTTGTCC 9.2 0.0092 P8 GC+1d culture CCAGCAGCCT (3) GGGCTTTGGC TAATATTTTT TGCCTTGTCC TTTTATTCTC 12.5 0.0125 P8 GC+SHH+1d culture CCAGCAGCCT (3) GGGCTTTGGC TAATATTTTT TGCCTTGTCC 13 0.013 3T3 fibroblasts TGCCTTGTCC 17.5 0.0175 P1 cortex TGCCTTGTCC TTTTATTCTC 13.6 0.0136 Hypothalamus TAATATTTTT 1.8 0.0018 E12.5 retina GGGCTTTGGC TAATATTTTT TGCCTTGTCC 9.4 0.0094 E14.5 retina GGGCTTTGGC TAATATTTTT 7.3 0.0073 E16.5 retina TAATATTTTT TGCCTTGTCC 5.4 0.0054 E18.5 retina GGGCTTTGGC TAATATTTTT TTTTATTCTC 14.5 0.0145 P0.5 retina GGGCTTTGGC 2 0.002 P2.5 retina GGGCTTTGGC TAATATTTTT 7.1 0.0071 P4.5 retina GGGCTTTGGG (2) TAATATTTTT TGCCTTGTCC 8 0.008 P6.5 retina TAATATTTTT TGCCTTGTCC TTTTATTCTC 8.3 0.0083 P10.5 crx+ retina GGGCTTTGGG (2) TGCCTTGTCC 3.8 0.0038 Adult retinal GGGCTTTGGG (2) 1.9 0.0019 ONL TAATATTTTT TGCCTTGTCC 3.8 0.0038