Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.8137	Chd1	chromodomain helicase DNA binding protein 1	17	17 7.2 cM	12648
Gene Ontology	ATP binding | ATP dependent helicase activity | chromatin | chromatin assembly/disassembly | chromatin binding | DNA binding | helicase activity | hydrolase activity | nucleic acid binding | nucleus
Human Homolog	CHD1[chromodomain helicase DNA binding protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 59 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATGGATGCA (2) CTCATTCTGC GGAGACAGAA (2) 16.3 0.0163 P8 GC+1d culture AATGGATGCA (2) GAGTAGCTGT (3) TTTCAGGAAG 22.7 0.0227 P8 GC+SHH+1d culture AAAGGGAAAA (2) AATGGATGCA (2) ATCACAGGTC GTGCTTCTCC TGGGCAATAA 25.8 0.0258 E15 cortex AATGGATGCA (2) ATCACAGGTC TTTCAGGAAG 24.6 0.0246 P1 cortex AATGGATGCA (2) TGGGCAATAA 22.7 0.0227 Hypothalamus AATGGATGCA (2) GAGTAGCTGT (3) GTGCTTCTCC 14.5 0.0145 E12.5 retina AAAGGGAAAA (2) AATGGATGCA (2) TGGGCAATAA 22.6 0.0226 E14.5 retina AATGGATGCA (2) GTGCTTCTCC 7.3 0.0073 E16.5 retina AATGGATGCA (2) CTCATTCTGC TGGGCAATAA 16.3 0.0163 E18.5 retina AAAGGGAAAA (2) AATGGATGCA (2) 9.1 0.0091 P0.5 retina AAAGGGAAAA (2) AATGGATGCA (2) CTCATTCTGC GGAGACAGAA (2) TGGGCAATAA TTTCAGGAAG 23.7 0.0237 P2.5 retina AATGGATGCA (2) ATCACAGGTC GGAGACAGAA (2) TGGGCAATAA 16 0.016 P4.5 retina AATGGATGCA (2) GTGCTTCTCC TGGGCAATAA TTTCAGGAAG 23.9 0.0239 P6.5 retina AAAGGGAAAA (2) AATGGATGCA (2) CTCATTCTGC GGAGACAGAA (2) TGGGCAATAA 20.1 0.0201 P10.5 crx- retina AATGGATGCA (2) 5.6 0.0056 P10.5 crx+ retina AATGGATGCA (2) GGAGACAGAA (2) TGGGCAATAA 19.2 0.0192 Adult retinal AATGGATGCA (2) CTCATTCTGC GAGTAGCTGT (3) 11.2 0.0112 ONL AATGGATGCA (2) GGAGACAGAA (2) TGGGCAATAA TTTCAGGAAG 11.4 0.0114