| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GGTTTTTTAA (2) GTCCTAAAAA (2)
| 3.2 | 0.0032 |
| Cb medulloblastoma | GGAAAGGCAA
| 6.9 | 0.0069 |
| P8 GC+1d culture | ATTTAACCTT GGAAAGGCAA TGAATAAACT
| 14.8 | 0.0148 |
| P8 GC+SHH+1d culture | ATTTAACCTT GATTAAACAA GGAAAGGCAA
| 11.7 | 0.0117 |
| 3T3 fibroblasts | GATTAAACAA TGAAGACACT
| 7 | 0.007 |
| E15 cortex | ATTTAACCTT
| 4.9 | 0.0049 |
| P1 cortex | TGAAGACACT TGAATAAACT
| 18.1 | 0.0181 |
| Hypothalamus | GGAAAGGCAA TGAATAAACT
| 3.6 | 0.0036 |
| E12.5 retina | GATTAAACAA GGAAAGGCAA GGTTTTTTAA (2) TAAAGACACT
| 9.5 | 0.0095 |
| E14.5 retina | ATTTAACCTT GATTAAACAA GGTTTTTTAA (2) TGAATAAACT
| 14.5 | 0.0145 |
| E16.5 retina | GATTAAACAA GGTTTTTTAA (2)
| 5.4 | 0.0054 |
| E18.5 retina | GATTAAAAAA (2) GGTTTTTTAA (2)
| 5.4 | 0.0054 |
| P0.5 retina | ATTTAACCTT GATTAAACAA
| 5.9 | 0.0059 |
| P2.5 retina | GATTAAAAAA (2) GATTAAACAA GTCCTAAAAA (2) TGAAGACACT
| 8.9 | 0.0089 |
| P4.5 retina | ATTTAACCTT GATTAAAAAA (2) GATTAAACAA TAAAGACACT
| 13.9 | 0.0139 |
| P6.5 retina | ATTTAACCTT GATTAAACAA GGTTTTTTAA (2) TAAAGACACT
| 8.4 | 0.0084 |
| P10.5 crx- retina | ATTTAACCTT GATTAAACAA GTCCTAAAAA (2)
| 7.5 | 0.0075 |
| P10.5 crx+ retina | ATTTAACCTT GTCCTAAAAA (2) TGAATAAACT
| 5.7 | 0.0057 |
| Adult retinal | ATTTAACCTT
| 1.9 | 0.0019 |
| ONL | ATTTAACCTT GTCCTAAAAA (2) TAAAGACACT TGAAGACACT TGAATAAACT
| 13.3 | 0.0133 |