| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CTGTGTGTAA (3) GAAAATAATG (3) GCCGAGTCTG GTGGACCCTT (2)
| 11.4 | 0.0114 |
| Cb medulloblastoma | CTGTGTGTAA (3) GTGGACCCTT (2)
| 6.9 | 0.0069 |
| P8 GC+1d culture | CTGTGTGTAA (3) GAAAATAATG (3) GCCGAGTCTG GTGGACCCTT (2)
| 7.9 | 0.0079 |
| P8 GC+SHH+1d culture | CTGTGTGTAA (3) GAAAATAATG (3) GCCGAGTCTG
| 11.7 | 0.0117 |
| 3T3 fibroblasts | CTGTGTGTAA (3) GCCGAGTCTG
| 7 | 0.007 |
| E15 cortex | GCCGAGTCTG
| 4.9 | 0.0049 |
| Hypothalamus | GCCGAGTCTG
| 1.8 | 0.0018 |
| E12.5 retina | GAAAATAATG (3) GCCGAGTCTG
| 7.6 | 0.0076 |
| E14.5 retina | CTGTGTGTAA (3)
| 1.8 | 0.0018 |
| E16.5 retina | CTGTGTGTAA (3) GAAAATAATG (3) GCCGAGTCTG
| 7.2 | 0.0072 |
| E18.5 retina | GCCGAGTCTG
| 1.8 | 0.0018 |
| P0.5 retina | CTGTGTGTAA (3) GCCGAGTCTG GTGGACCCTT (2)
| 7.9 | 0.0079 |
| P2.5 retina | CTGTGTGTAA (3) GAAAATAATG (3) GCCGAGTCTG
| 7.1 | 0.0071 |
| P4.5 retina | CTGTGTGTAA (3) GAAAATAATG (3) GCCGAGTCTG
| 10 | 0.01 |
| P6.5 retina | CTGTGTGTAA (3) GAAAATAATG (3) GCCGAGTCTG
| 13.4 | 0.0134 |
| P10.5 crx- retina | CTGTGTGTAA (3) GAAAATAATG (3)
| 5.6 | 0.0056 |
| P10.5 crx+ retina | CTGTGTGTAA (3) GCCGAGTCTG
| 9.6 | 0.0096 |
| Adult retinal | CTGTGTGTAA (3) GAAAATAATG (3) GCCGAGTCTG
| 7.5 | 0.0075 |
| ONL | CTGTGTGTAA (3)
| 1.9 | 0.0019 |